Rhodocytophaga rosea: GXP67_19810
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Entry
GXP67_19810 CDS
T06412
Symbol
rfaD
Name
(GenBank) ADP-glyceromanno-heptose 6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
rhoz
Rhodocytophaga rosea
Pathway
rhoz00541
Biosynthesis of various nucleotide sugars
rhoz01100
Metabolic pathways
rhoz01250
Biosynthesis of nucleotide sugars
Module
rhoz_M00064
ADP-L-glycero-D-manno-heptose biosynthesis, sedoheptulose-7P => ADP-LDmanHep
Brite
KEGG Orthology (KO) [BR:
rhoz00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
GXP67_19810 (rfaD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
rhoz01005
]
GXP67_19810 (rfaD)
Enzymes [BR:
rhoz01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
GXP67_19810 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:
rhoz01005
]
Core region
GXP67_19810 (rfaD)
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GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
3Beta_HSD
RmlD_sub_bind
Polysacc_synt_2
Motif
Other DBs
NCBI-ProteinID:
QHT68730
UniProt:
A0A6C0GM65
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All DBs
Position
complement(4779182..4780147)
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AA seq
321 aa
AA seq
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MIIVTGAAGFIGSCLISRLNADGFTHIIAVDDFSHENKIPNLEGKQIKQRIDRKEFFTWL
DANNEHIEFIFHIGARTDTTEFDRNIFDELNVHYSQTIWQKCCDYQIPLVYASSAATYGL
GELGYDDNEALIPQLKPLNPYGDSKNEFDIWALQQERKPFFWAGLKFFNVYGPNEYHKAR
MASVIFHAFNQIKATGKMKLFRSHNPEFKDGEQMRDFVYVKDVVEVCMFLMHHRKNSGIY
NLGSGKARTFLDLVRNTFKAMQLPEQIDFVDTPADIRDKYQYFTEASMQKLISIGYIRPF
HSLEEGVQDYVSNYLAGHKYY
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atgattatagttacaggtgctgccggttttattggaagctgtctcattagccggctcaat
gcagatgggtttacccatattattgcggtagatgatttttcgcatgaaaacaaaattccg
aatctggaaggcaaacagattaaacagcggatagaccggaaggaatttttcacctggctt
gacgctaataatgagcatatagaatttatctttcacattggtgcccgcacggataccacc
gagtttgaccggaatatttttgatgaactgaatgtccactattcccaaaccatctggcag
aaatgctgcgattaccagattccgcttgtatatgcatcctcagcagcaacctatggctta
ggcgaactgggctatgatgacaatgaagccttaattcctcaactcaagccgcttaatccc
tacggagattctaaaaatgaatttgacatctgggctttacagcaggaaaggaagcctttt
ttctgggcagggctgaagttttttaatgtatatggccccaacgagtaccacaaagcccgg
atggcttcggtgatttttcatgcttttaaccagataaaagccaccggcaaaatgaagctt
ttccgttcccacaacccggaatttaaagatggcgaacagatgcgggattttgtgtatgta
aaagatgtggtagaagtatgcatgtttctgatgcaccaccggaaaaattcaggtatttat
aatttaggcagtggcaaagcccgtacttttttagacctggtccggaatacctttaaagcc
atgcaattaccagaacagattgactttgtagacacgccagccgacattcgcgacaagtac
cagtattttaccgaagccagtatgcagaaactcatttctattgggtatatacgtcctttt
cattctctggaagaaggtgtacaggattatgtcagcaattatctggctgggcataagtat
tattaa
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