Rhodocytophaga rosea: GXP67_24040
Help
Entry
GXP67_24040 CDS
T06412
Name
(GenBank) Rne/Rng family ribonuclease
KO
K08301
ribonuclease G [EC:3.1.26.-]
Organism
rhoz
Rhodocytophaga rosea
Brite
KEGG Orthology (KO) [BR:
rhoz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rhoz03019
]
GXP67_24040
03009 Ribosome biogenesis [BR:
rhoz03009
]
GXP67_24040
Messenger RNA biogenesis [BR:
rhoz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
GXP67_24040
Ribosome biogenesis [BR:
rhoz03009
]
Prokaryotic type
rRNA processing factors
GXP67_24040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
ATG17_like
ATPTG10
S1
Motif
Other DBs
NCBI-ProteinID:
QHT69495
UniProt:
A0A6C0GN92
LinkDB
All DBs
Position
5826341..5827912
Genome browser
AA seq
523 aa
AA seq
DB search
MSNELVINSTQKGGRIALLQDKRIVEYHLEESESSFTVGDIYLGVVRKLVPGLNAAFIDI
GYEKDAFLHYLDLGPNINSLNKFTKETIAKRNNTHKLNGFQLEPEIDKLGKISQVLSKNS
PILVQVVKEPISTKGPRLSCEISIAGRYIVLVPFSNTVNISKKITDKEERQRLLRLLSSI
RPQNFGIIVRTVAEGKDVAELDKDLSNLVEKWEQGYKTLKNAKPKEKIIGEMGRASSMLR
DMLNESFDSITVDDKDIYDEIKLYIRTIAPDKEKILKLYNGKTKIFESFGIEKQLKSIFG
RSVSLPGGGYVIIEHTEALHVIDVNSGNKSNSESDQETTAFNVNMEAAKEIARQLRVRDM
GGIIVVDFIDMKKADNKRLIYEKMKEEMKNDRSKFTILPLTKFGLMQITRQRVRPELNIT
TGENCPTCGGTGKITASILVADLVENNLDYILTKQNEKDLSIVLHPYLHAYFVAGFPSRR
MKWFFKYKRWVKIVKDTSLGITEYKFKNHMGEDIEMSPAEVIV
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
ttgagtaacgaattagtaatcaattctactcaaaaaggtgggagaatagcccttttacag
gacaaaaggattgtagagtaccatcttgaagaaagtgaaagcagtttcacagtaggagat
atatatttaggtgtggtcaggaaactggttccgggtttaaatgcggctttcatagacatt
ggttatgagaaagatgcatttctgcattatctggatttagggcccaatattaattccctg
aataaatttaccaaagaaacgatagccaaacgcaataatacccacaagctgaatggcttc
cagttagaacctgaaattgacaaactcggcaaaatttcccaagttttaagtaaaaatagt
cctattttggtacaggtagtaaaagaacctatctctaccaaaggcccccgtttgtcctgc
gagatctctatcgccggccgctatatcgttttagttcccttctcaaataccgttaatatt
tccaagaagattacggataaagaagaaagacaacgtttgttgcgcttgttatcttctatc
agaccgcaaaattttggaattattgtacgtacggtagcagaaggaaaagatgtagctgag
ctggacaaagatctaagtaacctggttgaaaaatgggaacagggctataaaacgctgaaa
aatgccaagcctaaagagaagattatcggcgaaatgggccgggcatcttctatgttgcgt
gatatgctgaacgaaagtttcgacagcattacggtagatgataaagatatatacgatgaa
ataaagttgtatatccgtaccatcgctccggataaagagaaaatcttaaaattatataac
ggcaaaaccaaaatttttgaaagctttggaatcgaaaaacagctgaaatctatttttggc
cggtcagtaagcttgccaggtggaggatatgtaattattgaacatactgaagctctgcac
gtaattgacgtaaatagcggaaataaatctaattctgaatctgaccaggaaacgacagcg
tttaatgtgaacatggaagctgccaaagaaattgccaggcagctcagggtacgtgatatg
ggaggaattatagtggttgacttcattgacatgaaaaaggcagacaataagcgcctgatt
tatgagaaaatgaaggaagaaatgaaaaacgaccgttccaaatttaccatacttcccctc
actaaatttggccttatgcagattacccgacaacgggtgcggccagaactcaacattact
accggagaaaattgtccaacttgcggtggcactggtaaaatcacggccagtattcttgtc
gccgatctggtagaaaataacctggattatatactcaccaagcagaacgaaaaagacctt
agcattgtactccatccgtatctgcatgcttattttgtagccggctttccttccagaaga
atgaaatggtttttcaaatataagcgttgggtaaaaattgtaaaagatacatctctgggt
attacagagtacaaattcaaaaaccatatgggggaagatattgaaatgtcacccgccgaa
gtaatcgtttaa
DBGET
integrated database retrieval system
