Rhodocytophaga rosea: GXP67_25200
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Entry
GXP67_25200 CDS
T06412
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
rhoz
Rhodocytophaga rosea
Brite
KEGG Orthology (KO) [BR:
rhoz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rhoz03032
]
GXP67_25200
03400 DNA repair and recombination proteins [BR:
rhoz03400
]
GXP67_25200
Enzymes [BR:
rhoz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
GXP67_25200
DNA replication proteins [BR:
rhoz03032
]
Prokaryotic type
DNA Topoisomerases
GXP67_25200
DNA repair and recombination proteins [BR:
rhoz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
GXP67_25200
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
QHT69707
UniProt:
A0A6C0GP51
LinkDB
All DBs
Position
6095572..6096624
Genome browser
AA seq
350 aa
AA seq
DB search
MESIISETLSPVEFAKEAGLRYITDNISGFTRITRRKKYIYLDTGNKEISDEKIITRIES
LKIPHVWEQVWICPSPNGHLQATGIDSKGRKQYRYHTKWQHSRNSNKFSKMRSFGQALST
LREKIDHDIEENAFSRDKMLALVVSLLDNTLIRIGNKYYEKSNKSYGLTTLRNKHVKIDG
KEVKISFVGKKNVAQEVVLSDKRLVKLVKKCKELPGHQLFQYYDEEGHKHPISSDDVNDY
LRENTGLDLTAKDFRTWGGSTAAVKKLLEQPRPEDEKEIQKKLTEAVKYVASKLGNTVAV
CRNYYVHPIVLETYAEGKLTEAIPDAAEKKEQENKWLQPEEIIFLNLLES
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atggaatctattatttcagaaaccctttcgccggttgaatttgcgaaagaagccggtttg
cgctatatcaccgataatatatctgggttcaccagaattacgagaagaaaaaaatacatc
tatctggataccggaaataaagagatttcagatgaaaaaatcattacccggatcgaatca
ctgaaaattccgcatgtatgggagcaggtatggatctgtccttcgccaaatggacattta
caggcaacaggcatcgacagcaaaggccgcaaacaataccggtatcataccaaatggcag
cattcccgcaacagcaataagttcagtaaaatgcgctcctttgggcaagcattatctaca
ttgcgggaaaaaattgaccatgatattgaagaaaatgctttttccagagataaaatgctg
gcattagtggtaagcttactcgacaataccctgatccggattggaaacaaatattatgaa
aaatccaataagtcatacgggttaaccaccttgcggaataagcatgtgaaaattgatgga
aaagaagtaaaaatctcgtttgtgggaaagaaaaacgtggcccaggaagtggtactcagc
gacaaacggcttgtgaaactggtaaaaaaatgtaaagaattgccagggcatcagttgttc
cagtattatgatgaggaaggacacaaacatcctattagttcagatgatgtgaatgactac
ctgcgtgaaaacaccggacttgatctgacggcaaaggatttcagaacgtggggtggttca
acggctgccgtaaagaaactgctggaacaacccaggccggaagatgaaaaagaaatacaa
aagaaactaactgaagcggtgaagtatgtagcgagcaaactgggaaatacagtcgctgtt
tgccgtaattattatgttcatcctattgtgctggaaacttatgcagaaggaaagctaacg
gaagctataccggatgccgccgaaaaaaaggaacaggaaaataaatggctgcaacctgaa
gaaattatattcctcaatctgctggaaagttaa
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