Rhodocytophaga rosea: GXP67_25310
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Entry
GXP67_25310 CDS
T06412
Name
(GenBank) L,D-transpeptidase family protein
KO
K21470
L,D-transpeptidase YcbB
Organism
rhoz
Rhodocytophaga rosea
Brite
KEGG Orthology (KO) [BR:
rhoz00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
rhoz01002
]
GXP67_25310
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rhoz01011
]
GXP67_25310
Peptidases and inhibitors [BR:
rhoz01002
]
Cysteine peptidases
Family C82
GXP67_25310
Peptidoglycan biosynthesis and degradation proteins [BR:
rhoz01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
GXP67_25310
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Gene cluster
GFIT
Motif
Pfam:
YkuD
Scaffold
PG_binding_1
DUF948
Motif
Other DBs
NCBI-ProteinID:
QHT69727
UniProt:
A0A6C0GP74
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Position
6118549..6120264
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AA seq
571 aa
AA seq
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MPSPSTVRNSLVILLFLGIVLSQCQKKQDQPEQTPASSQTQTTPIQQELTLDTAKVAQYI
QQQVENLLIGEKVILSGDSVFSRKVLPQLYQNRSFRPAWLDTAYAATLLKAIASADQEGL
MKEEYHYTALTSLKKQLDQQETDSASILAQFDILLTDGILKYGNHLLNGKILPKDYISTW
NYKERMVGDTIVDAFQKAMHARTIVKELDNLKPDMRIYTFFKEKLVQFHTLAQGDTLPNI
PEVTTSIRPKTSQPAIALIKDRLRFWGYLPARTDTAREYYDDSLLVAVKQFQAMHALEAD
GVIGKTTIREMNTPVKDRIDQIRINLERLRWVASSLSDRYMIVNIAAFELYLFEQRKLLW
STNVMTGAVTTSTPIFKSQISYLVFNPTWTVPTSIVNSSIIPGIKRDASYLAKNHYTLVS
YSGKTVSAESINRSTISARNFPYSVVQTPGSHNALGKVKFMFPNQYAIYLHDTPSKHLFT
KTDRAFSHGCIRVQDPLKLAQILLADTLNWSAGKIQQVVGEGTTKTVFLKNKLDIMIMYW
TTGMDASGYIKFYKDIYKRDPELLKALNQFT
NT seq
1716 nt
NT seq
+upstream
nt +downstream
nt
atgccgtcaccatcaaccgtcagaaattctctggtaatcctcttattcctgggaatagtg
ctgagccagtgccagaaaaaacaggaccagccagaacagactcctgcttcttcccagaca
caaacaacacctatccaacaagagcttacgcttgacacagcaaaagtagcccagtatatt
cagcaacaggtagaaaatttattaataggcgagaaagtaattttgtccggcgattctgtt
ttttccagaaaagtactgccgcagctatatcaaaaccgcagcttccgtccggcctggctc
gatactgcctatgcagccactttgctgaaagcgattgctagtgccgaccaggaaggcctg
atgaaagaagaataccactatacagccctcacttcccttaaaaagcaactcgatcagcag
gagaccgattcagccagtatattggcccagtttgacattttacttaccgatggtatactc
aagtatggcaatcacctgttgaatggaaaaattttgcctaaagactatatctccacctgg
aactacaaagaacgcatggtaggcgataccattgtagatgcctttcagaaagccatgcat
gccagaaccatagtgaaagaactcgacaacctgaaaccggatatgcgcatctatactttt
ttcaaggaaaaattagttcagttccatacccttgcccaaggtgatactttacccaacata
cctgaagtaacgacttctatccgcccaaaaaccagccagccggcaattgccctgattaaa
gacaggctccgcttctggggatatcttccggccagaaccgataccgccagagaatactat
gatgatagcctgctggtggctgtgaagcaatttcaggccatgcatgcccttgaagcagac
ggcgtaattggcaaaactaccatccgggaaatgaatacaccagtgaaagaccgcatcgac
cagatccggattaatctggaacgcctccgctgggtagcttccagcctctcagaccggtat
atgattgtaaatattgccgcctttgaattgtatttatttgaacaacggaaattgctctgg
agtaccaacgttatgacaggcgctgtaactacttctacacctatttttaaatcgcagatc
agttacctggtatttaaccccacctggacggttcccactagtattgtcaatagctctatt
attccaggcatcaaacgggatgcttcttatttggctaaaaaccattatacgctggtttcc
tacagtggcaaaacggtgtctgctgaaagcattaaccggagcacgatttctgccaggaac
tttccctattcagttgtacaaacgccaggttcacacaatgccctgggcaaagtaaaattt
atgtttcctaaccagtatgccatttacctgcatgatacgcccagcaaacatttgtttaca
aaaacagaccgggcttttagtcatggatgtatccgggtacaagatcctttgaaattagcc
caaatcctgcttgctgacactctgaactggagtgccggaaaaattcagcaagtggtaggt
gaggggaccaccaaaacggtttttctgaaaaataaactcgatattatgatcatgtactgg
actaccggaatggatgccagtggctatatcaagttttacaaagacatttacaaacgagat
cccgaattactgaaagccttaaatcagttcacgtag
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