KEGG   Rhodocytophaga rosea: GXP67_25790
Entry
GXP67_25790       CDS       T06412                                 
Symbol
polA
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
rhoz  Rhodocytophaga rosea
Pathway
rhoz03030  DNA replication
rhoz03410  Base excision repair
rhoz03420  Nucleotide excision repair
rhoz03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:rhoz00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    GXP67_25790 (polA)
   03410 Base excision repair
    GXP67_25790 (polA)
   03420 Nucleotide excision repair
    GXP67_25790 (polA)
   03440 Homologous recombination
    GXP67_25790 (polA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:rhoz03032]
    GXP67_25790 (polA)
   03400 DNA repair and recombination proteins [BR:rhoz03400]
    GXP67_25790 (polA)
Enzymes [BR:rhoz01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     GXP67_25790 (polA)
DNA replication proteins [BR:rhoz03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     GXP67_25790 (polA)
DNA repair and recombination proteins [BR:rhoz03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     GXP67_25790 (polA)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     GXP67_25790 (polA)
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N DNA_pol_A_exo1 5_3_exonuc DNA_polI_exo1 HHH_2 HHH_5 DNA_pol_lambd_f HHH RecR_HhH
Other DBs
NCBI-ProteinID: QHT69814
UniProt: A0A6C0GPP5
LinkDB
Position
complement(6254590..6257412)
AA seq 940 aa
MSKPIHKLFLLDAYALIYRAHFAFSKAPRITSKGMNTSAIFGFTNTLLEVLQKEKPTHIG
VAFDTAAPTFRHTTYTEYKSQRQAQPEDITIAVPYVKKLVKAFGIPVLAMDGFEADDVIG
TIAKRAAREGFEVFMMTPDKDYGQLVEEHVYLYKPAFMGKGVEILGEKEILQKWGIKRID
QVIDMLGLQGDAVDNIPGIPGVGEKTAQKLIEEFDTVENLIANATQLKGKQKDNVEQYAQ
QALLSKQLATIDINVPVPFEADELKCREADKVVLSELLDELEFRTIKKRLFGEEPVPGAS
AAPKAAAKKTNQPEFSFELDFNPALLTETAELPPSDKASIHTVLHQYHVIDTPELRKLLI
EHLSRQDEFCFDSETNSIDAVAAELVGLAFSYYKNEAYYVPIPADQKEAQAIVNEFKPVL
ENPAIGKIGQNLKYDIIVLKNYGVQVRGKIFDTMLAHYLLEPDMRHNMDILAETYLHYQT
VSIESLIGKKGKDQITMDKVEIEKIAEYAGEDADITLQLKEVFLPKLRENKMEKLFYEIE
NPLVPVLAEMERTGVKVDTVALGELSKILEGDLKGLEDKIFTLSGTPFNIGSPKQLGEVL
FDQMKLDPKAKKTKTGQYATGEDILSKLEGDHEIIRHILDYRELQKLKSTYIDALPILMS
PKDGRIHTSYNQAVTATGRLSSTNPNLQNIPIRTERGREIRKAFVPHNESFTILSADYSQ
IELRIMAAFSQDQTMLDAFQKGIDIHTSTASKVFKVDLKEVTSDMRRKAKTINFGIIYGI
SAFGLGSRLNIPRKEAGEIIDAYFQEFPAVKKYMDSSIQKARDCEYAETLLGRRRYLRDI
NSRNMTDRNFAERNAINAPIQGTAADMIKIAMIRIHEYIEQEKLQSRMILQVHDELVFDA
HKDEVETLKTQVEDIMKHALPLGVPMEIGIGTGNNWLEAH
NT seq 2823 nt   +upstreamnt  +downstreamnt
atgtctaaacccattcataaactatttctcttagatgcctatgccctgatttaccgggca
cattttgcctttagcaaagcacccagaattacatctaaaggaatgaataccagtgccatt
ttcggctttaccaataccctgctggaagtgttacaaaaagaaaaaccaacccatattggc
gtagcttttgatacggctgcgcccactttccgccatactacttatacggagtataaaagc
cagcggcaagcacagcctgaagatattaccattgcggtaccttatgtaaaaaaactggta
aaagcattcggcattccggtactggccatggatggctttgaggcggatgatgtaatcgga
accattgccaaaagggcagccagggaaggttttgaagtgtttatgatgaccccggataaa
gattacggacagttggtagaagaacatgtatacctgtataaaccggcttttatgggaaaa
ggggtagaaattttaggagaaaaggaaatattgcaaaaatggggcattaaacggattgac
caggtaatagatatgctgggtttgcagggcgatgccgtagataacattcctggcattcca
ggtgtgggtgaaaaaacggcacaaaaactaattgaggaatttgataccgtagaaaacctg
attgctaatgctacacaattaaaaggcaaacaaaaagataatgtcgaacaatatgcccag
caggcacttttatccaaacaattagccaccattgatattaatgtacctgttccatttgaa
gctgatgaactcaaatgcagggaagccgataaagtagtgttatcagagttactcgatgag
cttgagttccgcacgattaaaaagcgtttgtttggagaagaacctgttccaggcgcaagt
gcggcaccaaaagctgcggctaaaaaaaccaaccagccggagttttcctttgaactggat
tttaatccggctttacttaccgaaacggctgaactgcctccttcggataaggcaagcatt
catacagttttgcatcagtaccatgtgatcgatacgccagagctacgcaaattattgatc
gaacacctgagccgtcaggatgagttttgtttcgattctgaaaccaatagtatcgatgca
gtggcagcagaactggttgggctggctttcagctattataaaaatgaagcctattatgta
cccatcccagctgaccagaaagaggctcaggcgattgtaaatgaatttaagccggtactg
gaaaatccggccattggcaaaataggccagaatttgaagtatgatattattgtactaaaa
aattatggggtacaggtccggggtaaaatcttcgataccatgcttgcccattatctgctg
gagccggatatgcgccataatatggatattctggctgaaacgtatctccactaccagaca
gtttctattgaatcgctcattggaaagaagggaaaagaccagattacgatggataaggtg
gaaatcgaaaaaatcgcggagtatgcaggtgaagatgcggacattaccctgcaattgaaa
gaagttttcctgcctaaactcagagaaaacaagatggaaaagttattttatgagatagaa
aacccgctggttccggtactggcagaaatggaacgtactggcgtaaaagtagatacagta
gcattgggcgaactttccaaaattttggaaggtgacttaaaaggactggaagataaaatt
tttacgttgtccggtacaccattcaacattggttctcccaaacagcttggtgaggtcttg
ttcgaccagatgaaactagaccctaaagccaaaaaaaccaaaaccggccagtatgccacc
ggagaagatattttatccaaactagaaggcgaccatgaaattatccgccatattctggat
taccgcgaattacagaagcttaaatctacctatatagatgccctgcctattttgatgagc
cccaaagatggccgtattcatacttcttacaatcaggcggtaactgctaccggacgcttg
agttctaccaatcccaatttgcagaatattcccatccgtacggaaagaggccgggagatc
cggaaagcatttgtgccacataatgaatcgtttaccattctttctgcagattattcccag
attgaattgcgtattatggctgctttcagccaggaccagacgatgctggacgcttttcaa
aagggcatagatattcacacatctacagcaagtaaggtgtttaaagtagatttaaaagaa
gttacctcagatatgcggcgcaaggcgaaaaccatcaattttggtattatttacggcatt
tcggcctttggattaggcagccgcctgaatattccccgtaaagaagccggagaaattatt
gatgcctatttccaggaatttccggctgtaaaaaaatacatggatagctctatccagaaa
gcccgtgattgcgagtatgccgaaaccctgcttggcagaagacgttacctgcgtgatatc
aattcccgcaatatgaccgaccgcaactttgccgaacgcaatgccatcaatgcgcccatc
caaggcacagccgctgacatgatcaaaattgccatgattcgcattcacgaatatatcgaa
caggaaaagttgcagtccagaatgattttgcaggtacacgacgaactagtatttgatgcc
cataaagatgaagtagaaacgttgaaaacacaggtagaagatattatgaaacatgccctt
ccgcttggtgtacctatggaaattggtataggaaccggcaataactggctggaagcacat
taa

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