Rhodocytophaga rosea: GXP67_26030
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Entry
GXP67_26030 CDS
T06412
Name
(GenBank) DEAD/DEAH box helicase
KO
K05591
ATP-dependent RNA helicase DbpA [EC:
5.6.2.6
]
Organism
rhoz
Rhodocytophaga rosea
Brite
KEGG Orthology (KO) [BR:
rhoz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rhoz03009
]
GXP67_26030
Enzymes [BR:
rhoz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
GXP67_26030
Ribosome biogenesis [BR:
rhoz03009
]
Prokaryotic type
rRNA helicases
GXP67_26030
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C
DbpA
DEAD
RTBV_P46
Motif
Other DBs
NCBI-ProteinID:
QHT69858
UniProt:
A0A6C0GP89
LinkDB
All DBs
Position
complement(6321620..6322600)
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AA seq
326 aa
AA seq
DB search
MLDHLQRNTFDPTYISGIVLDEADKLLALGFEEQLKQIITYLPANRQNLLFSATFPPAVE
QLVKAVLNYAVFIRTNAAANPDKIEFKAFRISAEAKPSLLLRLLSTLKQERIVIFCNTRE
RVDEIADLLKRQEFPVAGLHGAMDQPTRDQVMAKFRNGSISYLVATDLAARGLHIEELNV
VIHLEILREEASFLHRSGRTGRAGKSGVVYLFLSETEEKYLQKWQQIKDIHWLHQKSLSE
TRTTMATTPEFITIHLKAGKKEKMSAGDIVGAILAKTQLQANQIGKIEIFDHFSYVAVPF
EEGKALVDILNQVKIKGNKIRASLVK
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
gtgctcgatcatttgcaacggaatacgttcgatccaacatatataagtggcatcgttctg
gatgaagcagataaactattggcattaggctttgaagaacagctcaaacagatcataacc
taccttccggcaaacaggcaaaatctcctgttttcggctacttttcctccggctgtcgaa
caactggtaaaagctgtgttgaattacgctgtttttatccgcaccaatgctgccgctaat
ccagacaaaattgaattcaaagctttccgtatttctgctgaagccaagccatctttacta
ttgcggcttctttctacactcaaacaggagagaatcgttattttttgtaacaccagagaa
cgggtggatgaaatagcggatttgctgaaacggcaggaatttccggtggcaggtttacat
ggagcgatggatcagcctacccgtgatcaggtgatggcaaaattcagaaatggttctatc
tcctatctggtagccacagatcttgccgccagaggtttacacattgaagaattgaatgta
gtgatacatttggaaatcctgcgggaagaagccagtttcctgcaccgcagcggccggacc
ggaagagccggcaaaagtggagtagtgtatttatttttatcagaaacggaagaaaaatac
ctgcaaaaatggcaacaaataaaagatatacactggcttcatcagaaatcactttctgaa
accagaaccaccatggcaaccacccctgaatttattaccattcatttgaaagcaggcaag
aaagaaaagatgagcgctggagatattgtaggggctattctggcaaaaacccagttacag
gctaatcagatcggcaaaatcgaaatattcgaccatttcagttatgtggctgttcctttt
gaggaaggtaaagcactcgttgatatactcaatcaggtaaaaatcaaaggcaataagatc
agggcatctctggtgaagtaa
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