Rhodobacter xanthinilyticus: LPB142_01050
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Entry
LPB142_01050 CDS
T04631
Name
(GenBank) DNA mismatch repair protein MutS
KO
K03555
DNA mismatch repair protein MutS
Organism
rhp
Rhodobacter xanthinilyticus
Pathway
rhp03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
rhp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
LPB142_01050
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rhp03400
]
LPB142_01050
DNA repair and recombination proteins [BR:
rhp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
LPB142_01050
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
AAA_29
nSTAND_NTPase5
Motif
Other DBs
NCBI-ProteinID:
AOZ68074
UniProt:
A0A1D9M884
LinkDB
All DBs
Position
202684..205323
Genome browser
AA seq
879 aa
AA seq
DB search
MSEPTVTPMMAQYLGIKEANPGALLFYRMGDFYEMFFDDAVAAAAALDIALTKRGLHLGE
EIPMCGVPVHAAEGYLLTLIRKGFRVAIAEQLEDPAEAKKRGAKSVVKRDVVRLVTPGTL
TEESLLEARRHNFLAAWAELREEAALAWVDISTGDFRVMPCPLLRLGPELARLAPREVLV
SELKEQDCAGIVSDLRAALTPLARSSFDSQGAEKRLCDLFGVGSLDAFGTFSRAEISAMG
AIVDYLDLTQRGKLPLLRRPLREDSGALMQIDAATRRNLELTQALSGGREGSLLHVIDRT
VTAGGARLLERRISAPSRDLGQIHARHETIRFLLEQSRFSEDLRADLRRCPDMDRALSRL
ALDRGGPRDMTAIRAGLTQASAISARLAQTDAPALLRNAASALVGHETLVALLEAALVAE
PPLLARDGGFIAPGYEPDLDQTRQLRDEGRGVIARMQAQYIDETGITSLKIKHNNVLGYF
IETTATHAEKMLNPPLSERFIHRQTTANQVRFTTLELSELETRILNAGARALEIEKRLYD
SLKAAILDHAGPIGEASRALAEIDLATAFADLAAGEGWVEPQIDASRAFDIEAGRHPVVE
AALKRAREPFIANDCALTTGETPAIWLLTGPNMAGKSTFLRQNAIIALLAQAGSFVPARR
AHIGLVSQLFSRVGAADDLARGRSTFMVEMVETAAILNQADDRALVILDEIGRGTATYDG
LSIAWAVMEHLHGTNRCRALFATHYHEMTALSAKLAGVENATVAVKEWDGEVIFLHEVRK
GAADRSYGVQVARLAGLPETVVARARVVLDALEKGEREGGAKKQMVIDDLPLFSAAPPPR
VEKPAPSAVEETLRSLNPDEMTPREALEALYALRAQLKL
NT seq
2640 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaaccgaccgtcacgccgatgatggcgcaatatctcgggatcaaggaagcgaac
ccgggggcgctcctgttttatcgcatgggcgatttctacgagatgttcttcgacgatgcg
gtggcggcggcggcggcgctcgatatcgcgctgacgaaacgcggcctgcatctgggcgaa
gagatcccgatgtgcggcgtgccggtccatgccgccgagggctatctgctcacgctgatc
cgcaaggggtttcgcgtggccatcgccgagcagctcgaagaccccgccgaggccaagaaa
cgcggcgcgaaatcggtggtgaagcgcgatgtcgtgcggctggtgacgccgggcacgctg
accgaggaaagcctgctcgaggcgcggcggcacaatttcctcgccgcctgggccgagctg
cgcgaggaagccgcgctcgcctgggtcgatatctcgacgggtgatttccgggtaatgccc
tgcccgctcctgcggctcggaccggagctcgcgcggctggccccgcgcgaggtgctggtg
agcgagctgaaagagcaagattgcgccggaatcgtctctgatttgcgggccgcgctgacg
ccgctggcgcggtcgagcttcgatagccagggggccgagaagcggctttgcgatctcttc
ggcgtgggctcgctcgatgcgtttggcaccttctcgcgcgccgagatttcggcgatgggc
gcgattgtcgattatctcgacctgacccagcggggcaaactgccgctcctgcgccggccc
ttgcgcgaggatagcggcgcgctgatgcagatcgacgccgcgacccggcgcaacctcgag
ctgactcaggcgctctctggcgggcgcgagggatcgcttctgcatgtgatcgaccgcacc
gtcacggccggcggcgcgcggctcctcgagcggcgcatctccgccccctcgcgcgatctc
ggccagatccatgcgcggcatgaaaccatccgttttctgctggaacagagccgcttttcc
gaggatctgcgcgccgatctgcgccgctgcccggatatggatcgggcgctctcccgcctc
gcgctcgaccgtggcggcccgcgcgacatgaccgcgatccgcgcggggctcacccaggcc
agcgcgatctccgcgcgccttgcccagaccgacgcacccgcgctcttgcgcaacgcggcc
tcggcgctcgtcgggcatgagacgctcgtggcgctgctcgaggcggcgctcgtggccgag
ccgccgcttctggcgcgcgatggcggtttcatcgcgcccggctacgagcccgatctcgac
cagacccgccagctgcgcgacgagggtcgcggcgttatagcgcggatgcaggcgcaatat
attgatgaaactgggatcacctccctcaagatcaagcataacaacgtgcttggctatttc
atcgagactaccgcgacccatgccgagaagatgctgaacccgccgctgagcgaacgtttc
atccaccggcagaccaccgcaaaccaggtgcgcttcacgacgctcgagctcagcgagctc
gaaacccggatcctgaacgccggagcgcgcgcgctcgagatcgaaaagcggctctatgac
agcctgaaagcagcgattctcgaccacgccgggccgatcggcgaagcctcgcgcgcgctc
gcggagatcgacctcgccaccgcctttgccgatctcgccgccggcgaaggctgggtcgag
ccacaaatcgacgcctcccgcgccttcgatatcgaggccgggcgccaccccgtcgtcgag
gccgccctcaaacgcgcccgcgagcccttcatcgccaatgattgcgcgctgaccacgggc
gaaacccccgcgatctggctgctcaccggcccgaacatggcgggcaagtcgaccttcctg
cggcaaaacgcgatcatcgcgctcctcgcgcaggcgggctcgtttgtcccggcgcggcgc
gcccatatcggcctcgtcagccagcttttctcgcgcgtcggcgccgccgatgacctcgcg
cgcggccgctcgaccttcatggtcgagatggtcgaaaccgccgcgatcctgaaccaggcg
gatgaccgcgcgctcgtgatcctcgatgaaatcggccgcggcacggcgacctatgacggc
ctctcgatcgcctgggcggtgatggagcacctgcacggcacgaaccgctgccgcgccctc
ttcgccacgcattaccatgaaatgacagcactttccgcgaaactcgccggcgtcgagaac
gccaccgtcgcggtcaaggaatgggacggcgaggtgattttcctccacgaggtgcgcaag
ggcgccgccgatcgctcctacggcgtgcaggtcgcgcgccttgccggcctgcccgagact
gtcgtcgcgcgggcgcgggtcgtgctcgatgcgctggaaaagggcgagcgcgagggcggc
gccaagaaacagatggtgatcgatgatctgccgctgttctcggccgcgccgccgccccgc
gtcgaaaaacccgcgccgagcgccgtggaagaaaccctacgcagcctgaaccccgatgaa
atgaccccgcgcgaggcactcgaggcgctctacgccctccgcgcccagctcaagctctga
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