Rhodobacter xanthinilyticus: LPB142_02030
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Entry
LPB142_02030 CDS
T04631
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
rhp
Rhodobacter xanthinilyticus
Brite
KEGG Orthology (KO) [BR:
rhp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rhp03016
]
LPB142_02030
Enzymes [BR:
rhp01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
LPB142_02030
Transfer RNA biogenesis [BR:
rhp03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
LPB142_02030
Prokaryotic type
LPB142_02030
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
AOZ68239
UniProt:
A0A1D9M929
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All DBs
Position
411382..412281
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AA seq
299 aa
AA seq
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MARKKGREISGWLIVDKPAGVTSTAVVGKVRWALDAKKAGHAGTLDPAATGVLAVALGEA
TKTVSYLTEALKCYRFQVRLGTATTTDDAEGEVIETSAIRPDDAAIRAALGAFVGEIEQV
PPQFSAVKVEGARAYDLAREGEAMDLAARPLYVESLEMIARIDADTVELEMVCGKGGYVR
SIARDLGRALGSLGHVLWLRRLWSGPFDAEAGISLEEIDRLARSPELDAHLRPLEMGLFD
LPEVRATAEGAVRLRHGNPGMVIGAGEYGEEAWASYEGKPVAVGRLMGAELHPSRVFNL
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgcaagaagggtcgcgagatttccggctggctgatcgtcgacaaaccggcgggg
gtgacctcgacggcggtggtcggcaaggtgcgctgggcgctcgacgcgaagaaggcgggg
catgcgggcacgctcgacccggcggcgacgggggttctggcggtggcgctgggcgaggcc
acgaagacggtgagctatctgaccgaggcgctcaaatgctatcggtttcaggtgcggctg
gggacggcgacgaccaccgacgacgccgagggcgaggtgatcgagacctccgcgatccgg
cccgacgatgcggcgatccgcgccgctctgggcgcgttcgtgggcgagattgagcaggtg
ccgccgcagttttccgccgtcaaggtcgagggcgcgcgcgcctatgatctggcgcgcgag
ggcgaggcgatggatctcgccgcgcggccgctttatgtcgagagcctcgagatgatcgcg
cggatcgacgccgatacggtcgagctcgagatggtctgcggcaagggcggttatgtgcgc
tcgatcgcgcgcgatctggggcgggcgctcggctcgcttggccatgtgctctggctgcgc
cggctctggtcggggccgttcgatgccgaggcggggatctcgctcgaggagatcgaccgg
ctcgcgcgcagccccgagctcgacgcgcatctgcgcccgctcgagatggggctcttcgat
ctgcccgaggtgcgggccaccgccgagggcgcggtgcggctccgtcatggcaacccaggg
atggtgatcggcgcgggcgaatatggcgaggaggcctgggcgagctatgagggcaagccg
gtcgcggtcgggcggctgatgggcgccgagctgcatccgagccgcgttttcaacctctga
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