KEGG   Rhodobacter xanthinilyticus: LPB142_02940
Entry
LPB142_02940      CDS       T04631                                 
Name
(GenBank) diaminopimelate decarboxylase
  KO
K01586  diaminopimelate decarboxylase [EC:4.1.1.20]
Organism
rhp  Rhodobacter xanthinilyticus
Pathway
rhp00300  Lysine biosynthesis
rhp00470  D-Amino acid metabolism
rhp01100  Metabolic pathways
rhp01110  Biosynthesis of secondary metabolites
rhp01120  Microbial metabolism in diverse environments
rhp01230  Biosynthesis of amino acids
Module
rhp_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:rhp00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    LPB142_02940
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    LPB142_02940
Enzymes [BR:rhp01000]
 4. Lyases
  4.1  Carbon-carbon lyases
   4.1.1  Carboxy-lyases
    4.1.1.20  diaminopimelate decarboxylase
     LPB142_02940
SSDB
Motif
Pfam: Orn_Arg_deC_N Orn_DAP_Arg_deC Ala_racemase_N
Other DBs
NCBI-ProteinID: AOZ68397
UniProt: A0A1D9M986
LinkDB
Position
593617..594882
AA seq 421 aa
MDHFLYKDGVLHAEDVALPEIAAAVGTPFYVYSAATLTRHFRLFDEALAGTDHLVCFAIK
SNSNLAVLKLLGDLGAGMDVVSGGEYRRARAAGVPGERIVFSGVGKTREEIRLVLEGGIR
QFNVESEPELLAISEIAAGMGLEAPIALRVNPDVDAKTHAKIATGKSENKFGIPIAKARA
VYAQAAALPGIRVVGVDVHIGSQLTDLAPFEAAFEKVRELTLALREDGHAITRLDLGGGL
GIPYERSNTAPPLPVEYGALVKRVLGDLGCEIEIEPGRLISGNAGIMVASVIYLKEGEGR
DFLIVDAAMNDLVRPSMYDAWHDIVPVIEPAPGTEPAAFDVVGPVCETGDTFAKGRDLTP
LAPGDLVAFRSAGAYGAVMSSEYNSRPLIPEVLVQGDHFAVIRRRPSFEEMLARDSIPEW
L
NT seq 1266 nt   +upstreamnt  +downstreamnt
atggatcatttcctctataaagacggtgtgttgcacgccgaagacgtggccctgccggag
atcgcggccgcggtcggaacgccgttctacgtctattcggcggcgacgctgacgcgccat
ttccggctcttcgacgaggctttggcgggcaccgaccacctcgtctgtttcgcgatcaag
tcgaattcgaacctcgcggtgctgaagcttctgggcgatctcggcgcggggatggatgtg
gtctcgggcggcgaatatcggcgcgcgcgggccgccggcgtgcccggcgagcggatcgtc
ttttccggcgtcggcaagacccgcgaggagatccgcctcgtgctcgagggcggcatccgc
cagttcaacgtggaaagcgagcccgagctcctcgcgatctcggagatcgccgccggcatg
ggcctcgaggcgccgatcgcgctccgcgtgaaccccgatgtcgacgccaagacccatgcg
aagatcgccaccggcaaatccgagaacaaattcggcatcccgatcgccaaggcgcgcgcg
gtttacgcgcaggcggccgcgctgccgggcatccgcgtcgtcggtgtcgatgtccatatc
ggctcgcagctcaccgatctcgcgcccttcgaggcggccttcgagaaggtgcgcgagctc
acccttgcgctgcgcgaagatggtcatgcgatcacgcggctcgatctgggcggcgggctt
ggcatcccctatgagcgctcgaacaccgcgccgcccttgccggtcgaatatggcgcgctc
gtcaagcgcgtgctcggcgatctgggctgcgagatcgagatcgagcccgggcggctgatc
tcgggcaatgccgggatcatggtcgcctcggtgatctatctcaaggagggcgaggggcgc
gattttctgatcgtcgatgcggcgatgaacgatctcgtgcggccctcgatgtatgatgcc
tggcacgatatcgtgccggtgatcgagcccgcgccgggcaccgagcccgcggccttcgac
gtggtcgggccggtctgcgagacgggggataccttcgccaagggccgcgatctgacgccg
ctcgcgccgggcgatctcgtggccttccgctccgcgggggcttacggggcggtgatgtcg
tcggagtataactcgcgcccgctgatccccgaggttctggtgcagggggatcacttcgct
gtcatccggcgcagaccgagctttgaggaaatgctcgcgcgcgatagcatccccgagtgg
ctctga

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