Rhodobacter xanthinilyticus: LPB142_03670
Help
Entry
LPB142_03670 CDS
T04631
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
rhp
Rhodobacter xanthinilyticus
Pathway
rhp00260
Glycine, serine and threonine metabolism
rhp00460
Cyanoamino acid metabolism
rhp00630
Glyoxylate and dicarboxylate metabolism
rhp00670
One carbon pool by folate
rhp00680
Methane metabolism
rhp01100
Metabolic pathways
rhp01110
Biosynthesis of secondary metabolites
rhp01120
Microbial metabolism in diverse environments
rhp01200
Carbon metabolism
rhp01230
Biosynthesis of amino acids
rhp01240
Biosynthesis of cofactors
rhp04981
Folate transport and metabolism
Module
rhp_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
rhp00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
LPB142_03670 (glyA)
09102 Energy metabolism
00680 Methane metabolism
LPB142_03670 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
LPB142_03670 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
LPB142_03670 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
LPB142_03670 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
LPB142_03670 (glyA)
Enzymes [BR:
rhp01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
LPB142_03670 (glyA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
AOZ68524
UniProt:
A0A1D9M9J4
LinkDB
All DBs
Position
complement(734160..735452)
Genome browser
AA seq
430 aa
AA seq
DB search
MTAQRDAGFFTESLSTRDPELFGSITNELGRQRDEIELIASENIVSKAVMEAQGSVMTNK
YAEGYPGKRYYGGCQFVDVAENLAIDRAKALFGCEFANVQPNSGSQANQGVFTALLKPGD
TILGMNLASGGHLTHGAAPNQSGKWFNAVQYGVRKQDNRIDYDEVRALAKEHQPKLIIAG
GSAIPRQIDFAKFREIADEVGAWLMVDMAHFAGLVAGGQHPSPFPYADVATTTTHKTLRG
PRGGMILTNNEEIAKKVNSAIFPGIQGGPLMHVIAAKAVAFGEALRPEFKAYAEQVVKNA
QALADELMKGGLDIVTGGTDTHVMLVDLRPKGVKGNATEKALGRAHITCNKNGIPFDPEK
PTVTSGVRLGTPAGTTRGFGEAEFREIGRLIVEVVDGLAANGEDDNGAVEAAVKAKVEAL
CKRFPIYPTL
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcccaacgcgacgctggcttctttaccgaaagcctttccacccgtgacccggag
ctcttcggctcgatcaccaacgagctcggccgccagcgcgacgagatcgagttgatcgcc
tccgaaaacatcgtctcgaaggcggtgatggaggctcagggctcggtgatgaccaacaaa
tacgccgagggctacccgggcaagcgctactacggcggctgccagttcgtcgacgtggcc
gaaaacctcgcgatcgaccgcgccaaggcgctgtttggctgtgagtttgccaacgtgcag
ccgaactcgggcagccaggccaaccagggcgtgttcaccgcgctgctgaagcccggcgac
accatcctcggcatgaacctcgcctcgggcggccacctgacccacggcgcggcgccgaac
caatcgggcaaatggttcaacgcggtgcaatacggcgtgcgcaagcaagacaaccggatc
gattacgacgaggtccgcgcgctggccaaggagcaccagccgaagctgatcatcgccggc
ggctcggcgatcccgcggcagatcgatttcgccaagttccgcgagatcgcggatgaggtc
ggcgcctggctgatggtcgacatggcgcatttcgcgggcctcgtggccggcggccagcac
ccctcgcccttcccctatgcggatgtcgcgaccaccaccacccacaagaccctgcgcggc
ccgcgtggcggcatgatcctcaccaacaacgaggagatcgccaagaaagtgaactcggcg
atcttcccggggatccagggcggcccgctgatgcatgtgatcgcggcgaaggcggtggcc
ttcggcgaggcgctgcgccccgagttcaaggcctatgccgaacaggtcgtcaagaacgcg
caagcgctcgccgacgagctgatgaagggcggcctcgatatcgtcaccggcggcaccgac
acccatgtgatgctcgtcgacctgcgcccgaaaggcgtgaagggcaacgccaccgagaag
gcgctcggccgcgcgcatatcacctgcaacaagaacggcatcccgttcgacccggaaaag
ccgaccgtcacctcgggcgtgcgtctgggcaccccggcgggcaccacccgcggcttcggc
gaggcggagttccgcgaaatcggccgtctgatcgtcgaagtggtcgacgggctggccgcc
aatggcgaggatgacaacggcgcggtcgaagcggcggtgaaggccaaggtcgaggcgctg
tgcaagcgcttcccgatctacccgacgctctga
DBGET
integrated database retrieval system