Rhodobacter xanthinilyticus: LPB142_04660
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Entry
LPB142_04660 CDS
T04631
Name
(GenBank) isocitrate dehydrogenase (NADP(+))
KO
K00031
isocitrate dehydrogenase [EC:
1.1.1.42
]
Organism
rhp
Rhodobacter xanthinilyticus
Pathway
rhp00020
Citrate cycle (TCA cycle)
rhp00480
Glutathione metabolism
rhp00720
Other carbon fixation pathways
rhp01100
Metabolic pathways
rhp01110
Biosynthesis of secondary metabolites
rhp01120
Microbial metabolism in diverse environments
rhp01200
Carbon metabolism
rhp01210
2-Oxocarboxylic acid metabolism
rhp01230
Biosynthesis of amino acids
rhp04146
Peroxisome
Module
rhp_M00009
Citrate cycle (TCA cycle, Krebs cycle)
rhp_M00010
Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate
Brite
KEGG Orthology (KO) [BR:
rhp00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
LPB142_04660
09102 Energy metabolism
00720 Other carbon fixation pathways
LPB142_04660
09106 Metabolism of other amino acids
00480 Glutathione metabolism
LPB142_04660
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
LPB142_04660
Enzymes [BR:
rhp01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.42 isocitrate dehydrogenase (NADP+)
LPB142_04660
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Gene cluster
GFIT
Motif
Pfam:
IDH
Motif
Other DBs
NCBI-ProteinID:
AOZ68694
UniProt:
A0A1D9MA11
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All DBs
Position
947209..949413
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AA seq
734 aa
AA seq
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MADKNTPDIVYTKVDEAPELASASLLPIIQSFASVAGINVGTKDISLAGRILATFPENLT
EDQRQSDDLAWLGEWVKKPEANVIKLPNISASVPQLVAAVKELQGQGYAIPDYPETPATD
AEKEIRARYDAIKGSAVNPVLREGNSDRRAAVAVKKYAQSNPHRMGEWTAASKTRVAAMD
GGDFFSNERSATLAKAATAKIVLETADGEIVLKDAVKYPEGTVVDATFMSAAALDSFLDA
EIAKTKAEGVLFSIHMKATMMKVSDPIIFGHAVKAWLKPVFAQFGAELAALGVNPNSGLG
DLLARVKDNAAIMAAIEAVTAERPPMYMVNSDKGITNLHVPSDVIIDASMPALIRAGGKG
WGPDNQEHDCVCVIPDNSYAPVYDATIEFFKANGKLNPATAGTVQNIGLMAQKAEEYGSH
PTTFEIPADGTVKMILDDGTVLHAHKVEKGDIWRSASARKAPIEDWVNLAIDRQKATGYR
AIFWLDAARGHDAELIKMVKPILEAKGVADKFEIMAPREATIASLETITKGENTIAITGN
VLRDYLTDLFPILELATSAKMLSIVKLMQGGGMFETGAGGSAPKHVQQLVEENHLRWDSL
GEFCALGESFQFFADQSGNEKARVLGKAVDVATQGILDEDRSPSRKVGQPDNRDSHYWFA
RYWAKALAEQTEDAELAAHFAPVAQALIEGEAAILAELAAVQGKPADLGGYYHGDAAKTA
AVMRPSATLNAIFA
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
atggctgacaagaacacgcccgatattgtgtataccaaggtagacgaagcgcccgagctg
gcctcggcgtcgcttctgccgatcatccagagctttgcctccgtggcggggatcaatgtg
ggcaccaaggatatctcgctcgcgggccggatccttgccaccttcccggagaacctgacc
gaggatcagcgccagtccgacgatctcgcctggctcggcgaatgggtcaagaaacccgaa
gccaatgtcatcaagctgccgaatatctcggcctcggtgccccagctcgtcgccgcggtg
aaagagctgcaaggccagggctatgcgatccccgattacccggagaccccggcgaccgac
gccgagaaggaaatccgcgcgcgttatgacgcgatcaagggctcggcggtgaacccggtc
ctgcgcgagggcaactcggaccgtcgcgccgcggtggcggtgaagaaatacgcgcagtcg
aacccgcaccggatgggcgagtggacggcggccagcaagacccgcgtcgccgcgatggac
gggggcgatttcttctcgaacgagcgctcggcgacgctggccaaggccgcgaccgcgaag
atcgtgctcgagaccgcagacggcgagatcgttctgaaagacgcggtgaaataccccgag
ggcaccgtcgttgacgcgaccttcatgtcggccgccgcgctcgacagcttcctcgacgcg
gagattgccaagaccaaggccgagggcgtgctgttctcgatccacatgaaggcgacgatg
atgaaggtctccgacccgatcatcttcggccatgcggtcaaggcctggctgaagccggtc
ttcgcgcaattcggcgccgaactggccgcgctcggcgtcaacccgaactcgggcctgggc
gatctgctggcccgcgtgaaggacaatgccgcgatcatggccgcgatcgaggccgtcacc
gccgagcgcccgccgatgtatatggtgaactccgacaagggcatcaccaacctgcacgtc
ccctcggacgtgatcatcgacgcctcgatgcccgcgctgatccgcgccggcggcaagggc
tggggcccggacaaccaggagcatgactgcgtctgcgtgatcccggacaattcctacgcg
ccggtctatgacgccacgatcgagttcttcaaggccaatggcaagctcaacccggccacc
gccggcaccgtgcagaacatcggtctgatggcgcaaaaggccgaggaatacggctcgcac
ccgaccaccttcgagatccccgccgacggcaccgtcaagatgatcctcgacgacggtacc
gtgctgcatgcccacaaggtcgaaaagggcgacatctggcgctcggcctcggcccgcaag
gcgccgatcgaagactgggtgaacctcgccatcgaccgccagaaagccaccggctaccgc
gcgatcttctggctcgacgccgcgcgcggccatgacgccgagctgatcaagatggtcaag
ccgatcctcgaagccaagggcgtcgccgacaagttcgagatcatggccccgcgcgaagcc
accatcgcctcgctcgagaccatcaccaagggcgagaacaccatcgcgatcaccggcaac
gtgctgcgcgactacctcaccgacctgttcccgatcctcgagctcgcaacttcggcgaaa
atgctctcgatcgtgaagctgatgcagggcggcggcatgttcgaaaccggcgccggcggc
tcggcgcccaaacacgtccagcagctcgtcgaggaaaaccacctgcgctgggacagcctg
ggcgagttctgcgcgctgggcgagagcttccagttcttcgccgaccaatcgggcaatgaa
aaggcccgcgtgctcggcaaggcggtggatgtggcgacgcaagggatcctcgacgaggac
cgcagcccgagccgcaaggtcggccagcccgacaaccgcgacagccattactggttcgcg
cgctactgggccaaggcgctcgccgagcagaccgaggatgccgagctcgccgcgcatttc
gcgccggtcgcgcaggcgctgatcgagggcgaggcggcgatcctggccgagctcgccgcg
gtgcagggcaagcccgcggatctgggcggctactaccatggtgatgcggcgaaaaccgcc
gccgtgatgcgcccctcggcgacgctcaacgcgatcttcgcctga
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