Rhodobacter xanthinilyticus: LPB142_05790
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Entry
LPB142_05790 CDS
T04631
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
rhp
Rhodobacter xanthinilyticus
Pathway
rhp03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
rhp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
LPB142_05790
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rhp03400
]
LPB142_05790
DNA repair and recombination proteins [BR:
rhp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LPB142_05790
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
LPB142_05790
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_3rd
UvrB_inter
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
AAA_19
AAA_22
Kinesin
eIF3_p135
DUF87
AAA
Motif
Other DBs
NCBI-ProteinID:
AOZ68890
UniProt:
A0A1D9MAS3
LinkDB
All DBs
Position
complement(1168075..1170261)
Genome browser
AA seq
728 aa
AA seq
DB search
MPHNNTNLPTERPDVLTRPKLEGGKRFVMKSEFAPAGDQPTAIAEISAAVLGGERNQVLL
GATGTGKTFTMAKVIEETQRPAIILAPNKTLAAQLYGEFKGFFPDNAVEYFVSYYDYYQP
EAYVARTDTYIEKESMINEQIDRMRHSATRALLERDDVIIVASVSCIYGIGSVETYSAMT
QDMTVGGLYEQRKFLSDLVAQQYKRLDAAFQRGSFRVKGDTVDLWPAHLEDRAWRFSFFG
EELEGITEFDPLTGAKTDTFEQIRIYANSHYVTPRPTLQQAIKQIRVELAQQLKLFNAEG
KLLEAQRLEQRTNFDLEMLEATGVCNGIENYSRYLTGRAPGEPPPTLFEFIPDHAIVFAD
ESHVTVPQIGGMYRGDYRRKFTLAEHGFRLPSCMDNRPLKFEEWDAMRPQSVFVSATPAA
WEMEQAGGVFTEQVIRPTGLLDPEVEIRPVETQVDDLLDEIRKVAARGLRVLCTTLTKRM
AEDLTEYLHEQGIRVRYMHSDIDTIERIEILRDLRLGAFDVLIGINLLREGLDIPECGLV
AILDADKEGFLRSETSLIQTIGRAARNADGRVIMYADKITGSMERALAETNRRRAKQMAY
NEAHGITPQTVRKNVDDVLSGLWQGDTDMARVTAKVEKVQVGANLSAHLDSLRLQMRKAA
ENLEFEEAARMRDEIKRLEAVELAVADDPMARQEDVAQAAEEAVASVRGRSTAGRPGQRG
GVKRPRKR
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atgccgcataacaacaccaatctgcccacggaacggcccgacgttctgacccgccccaag
ctcgagggcggcaaacgcttcgtgatgaagagcgagtttgcccccgcgggcgaccagccg
acggcgattgcggagatttccgcggcggttctggggggggagaggaatcaggtgctgctc
ggcgcgaccggcaccggcaagaccttcaccatggccaaggtgatcgaagagacccagcgc
ccggcgatcatcctcgcgcccaacaagacgctcgcggcgcaattatacggcgaattcaag
ggcttcttccccgacaacgcggtcgagtatttcgtcagctactacgattactaccagccc
gaggcctatgtcgcgcgcaccgatacctatatcgagaaggaatcgatgatcaacgaacag
atcgaccggatgcgccactcggccacccgggcgcttctggaacgcgacgatgtgatcatc
gtggcctcggtgagctgcatctacggtatcggctcggtcgagacctattcggcgatgacc
caggacatgacggtcggcgggctctacgagcagcgcaagttcctctccgacctcgtcgcg
cagcaatacaaacgcctcgacgccgccttccagcgcggcagcttccgcgtcaagggcgat
acggtcgacctttggcccgcccacctcgaagaccgcgcctggcgcttcagcttcttcggc
gaagagcttgaagggattaccgaattcgacccgctgaccggcgcgaagaccgatacgttc
gagcagatccggatctatgcgaacagccactacgtcaccccgcgcccgaccctgcaacag
gcgatcaagcagatccgcgtggagctcgcccagcagctcaagctgttcaacgccgagggc
aagctgctcgaggcgcagcggctcgagcagcgcacgaatttcgacctcgagatgctcgag
gcgaccggcgtgtgcaacgggatcgagaattattcgcgctatctgaccgggcgcgcgccc
ggtgagccgccgcccacgctcttcgagttcatccccgatcatgccattgttttcgcggac
gaatcccacgtcaccgtgccgcagatcggcggcatgtatcgcggcgactaccggcggaaa
ttcacgctcgcggaacatggcttccggctgcccagctgcatggataaccgcccgctcaaa
ttcgaggaatgggacgcgatgcgcccgcaatcggtcttcgtctcggccaccccggcggcc
tgggagatggagcaggcgggcggcgtcttcaccgaacaggtgatccgccccaccggcctg
ctcgaccccgaggtcgagatccggcccgtcgagacccaggtcgacgatctgctcgacgag
atccgcaaggtggcggcgcgcgggctgcgggtcttgtgcaccacgctgaccaagcgcatg
gccgaggatctgaccgaatatctgcatgaacagggcatccgcgtgcgctacatgcattcc
gacatcgacacgatcgagcgcatcgagatcctgcgcgatctgcggctcggggcgtttgac
gtgctgatcgggatcaacctgctccgcgaggggctcgacatccccgaatgtgggcttgtc
gcgattctcgatgccgacaaggagggcttcctgcgctcggagacctcgctgatccagacc
atcggccgcgccgcgcgcaacgccgacgggcgggtgatcatgtatgccgacaagatcacc
ggctcgatggagcgcgcgctcgctgaaaccaaccgccgccgcgccaagcagatggcctat
aacgaggcccatggcatcacgccgcagaccgtgcgcaagaatgtcgacgatgtgctctcg
ggtctgtggcagggcgacaccgatatggcgcgcgtcactgcgaaggttgaaaaagtgcaa
gtcggggccaatctgagcgcccatctcgacagtctgaggttgcaaatgcgcaaggccgcc
gagaacctcgagttcgaggaagcggcccggatgcgcgatgagatcaagcggctggaggcg
gtggagctcgctgtggccgatgatccgatggcgcggcaggaggatgtggcgcaggccgcc
gaggaggccgtggcctcggtgcgcggccgctcgaccgccgggcgcccgggccagcgcggc
ggcgtcaaacgcccccgcaagcgctga
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