Rhodobacter xanthinilyticus: LPB142_07115
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Entry
LPB142_07115 CDS
T04631
Name
(GenBank) very short patch repair endonuclease
KO
K07458
DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-]
Organism
rhp
Rhodobacter xanthinilyticus
Brite
KEGG Orthology (KO) [BR:
rhp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rhp03400
]
LPB142_07115
DNA repair and recombination proteins [BR:
rhp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
LPB142_07115
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Vsr
Yop-YscD_ppl_1st
Motif
Other DBs
NCBI-ProteinID:
AOZ70935
UniProt:
A0A1D9MGD1
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Position
1442378..1442881
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AA seq
167 aa
AA seq
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MTDIVDSQTRSRMMAGIRGKDTKPELALRRSLHALGLRYRLHAKGIPGKPDLVLPKFKAV
IFVHGCFWHRHPECRYASTPATRPEFWESKFSANVMRDTTVRSELLAAGWRVATIWECAL
RSETGVTAVGDTVSRWLQGGGRELEMGEKDIGAPKDERSISVVSNQT
NT seq
504 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacatcgtcgacagccagacccgttcccggatgatggccgggatccgcggaaag
gacacgaagccggaactggccctccggcggtccttgcacgcgctgggcttgcgctaccgc
ctgcatgccaagggaatacccggcaagcctgatcttgtgctgccgaaattcaaggccgtc
atcttcgtgcacgggtgcttctggcacaggcacccggaatgccgctacgcaagcactccg
gcaacgcgcccggaattctgggagtcgaagttcagcgcgaatgtgatgcgggacactacc
gttcgatccgagttgttggcggctggatggcgggtcgcaacgatctgggaatgcgcattg
cgaagcgagactggcgttacggccgtgggcgacaccgtttcgcgatggctccaaggtggt
gggcgagagctcgagatgggcgagaaggacatcggggcgcccaaggatgagagaagcatc
tcggtcgtgtcgaaccagacctga
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