KEGG   Rhodobacter xanthinilyticus: LPB142_08600
Entry
LPB142_08600      CDS       T04631                                 
Name
(GenBank) helicase
  KO
K19789  DNA repair protein RadD
Organism
rhp  Rhodobacter xanthinilyticus
Brite
KEGG Orthology (KO) [BR:rhp00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rhp03400]
    LPB142_08600
DNA repair and recombination proteins [BR:rhp03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    Other HR factor
     LPB142_08600
SSDB
Motif
Pfam: ResIII Helicase_C DEAD UPF0547 AAA_30 SWI2_SNF2 Lipase_GDSL_2 AAA_22 DZR DZR_2 Zn_Ribbon_1 Cas3-like_C_2 ATP-grasp_5 zf-Tbcl_FmdE SLFN-g3_helicase Zn-C2H2_12
Other DBs
NCBI-ProteinID: AOZ69366
UniProt: A0A1D9MBY7
LinkDB
Position
1734287..1735975
AA seq 562 aa
MRLRPRQKTFVERSVAALASRGNTLGVAPTGAGKTIMLSAVTGEMIGDGAKACVLAHRDE
LTAQNRAKFQRVVPGVATSVIDATEKSWGGQVAFAMVPTLARASNLADMPRLDLLVIDEA
HHAVADSYRRIIDRVREANPDARIFGVTATPNRGDRKGLREVFDNVADQVRLGELIASGH
LVPPRTFVIDVGVQDELRSVRKTMSDFDMAEVAGIMDRAPVTDEVIRHWKEKAGDRQTVV
FCSTVAHAEHVTEAFRAAGVSAALIHGDLSAETRKAILADYAAGAIRVVVNVAVLTEGWD
HPPTSCVVLLRPSSYKSTMIQMVGRGLRTVDPEEHPGIVKTDCVVLDFGTSSLIHGTLEQ
DVDLDGKSETGEAPTKTCPACEAEIPLAATECPLCGEAFPREDEEAGEGGGAAPLSGFMM
TEIDLLKRSSFAWVDLYGTDDALMATGFAAWGGIFWLDGVWYAIGGAKGERPHLLGVGER
TVCLAQADDWLNTHETDESAFKTRSWLRQPPTEKQLQYLPPECRHDFGLTRYRASALMTF
GFNKRAIRQLIDTAASPERRAA
NT seq 1689 nt   +upstreamnt  +downstreamnt
atgcgcctgcgcccccgccagaagaccttcgtcgagcgcagcgtggctgcgctcgcctcc
cgcggcaacacgctgggcgtggcgcccaccggtgcgggcaagaccatcatgctctcggcg
gtcaccggcgagatgatcggcgacggcgcgaaggcctgcgtgctggcgcatcgcgacgag
ctgacggcgcagaaccgcgccaagttccagcgcgtggtgccgggcgtcgccacatcggtc
atcgacgccaccgagaagtcctggggcggccaggtcgccttcgcgatggtgccaacgctg
gcgcgggcatcgaatctggccgacatgccgcgcctcgacctgctggtcattgacgaggcg
caccatgccgtcgccgacagctaccgccgcatcatcgaccgcgtgcgcgaagccaatccc
gacgcccgcatcttcggggtcacggcgacgccgaaccggggcgacaggaagggcctgcgc
gaggtcttcgacaacgtggccgaccaggtgcggctgggcgagttgatcgcctcgggccat
ctcgtgccgccgcgcaccttcgtcatcgacgtgggcgtgcaggacgagttgcggtccgtc
cgcaagaccatgtcggatttcgacatggcggaggtggcgggcatcatggaccgcgccccc
gtcaccgacgaggtgatccgccactggaaggaaaaggcgggcgaccggcagaccgtggtg
ttctgctccaccgtcgcccatgccgaacacgtcaccgaggcgttcagggcggcgggcgtt
tccgccgcgctgatccacggcgatctttcagccgagacccgcaaggcgatcctcgccgac
tacgcggcgggcgccatccgcgtcgtggtcaacgttgcggtgctgaccgagggctgggac
cacccgcccacctcatgcgtcgtgctgctgcggcccagctcctacaagtccacgatgatc
cagatggtcgggcgcggcttgcgcaccgtcgaccccgaggaacaccccggcatcgtcaag
accgattgtgtcgtgctggattttggcacttcgagcctgatccacggcactctggaacag
gatgtcgatctcgacggcaagtccgaaaccggcgaggcgccgaccaagacctgtcctgcc
tgcgaggcggaaatcccgctggccgccaccgaatgcccgctctgcggcgaggcgttcccg
cgggaggacgaagaggccggtgaaggcggtggtgccgcgccgctctcgggcttcatgatg
accgagatcgacctgctaaagcggtccagcttcgcctgggtcgacctttacggcacggac
gatgcgctgatggccacgggcttcgcggcctggggcggcatcttctggctggacggggtc
tggtacgccatcggcggggcgaagggcgaacgcccccatctgctgggcgtgggcgagcgc
accgtctgcctcgcgcaggccgacgactggctgaacacccacgagaccgacgagagcgcc
ttcaagactcgctcctggctgcgccagccgccgaccgaaaagcagcttcagtacctgccg
ccggagtgccgccatgacttcggcctgacgcgctaccgcgcctccgcgctgatgaccttc
ggcttcaacaagcgcgccatccgccagctgatcgacacggcggcctctcccgaacggagg
gcggcatga

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