Rhodobacter xanthinilyticus: LPB142_08600
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Entry
LPB142_08600 CDS
T04631
Name
(GenBank) helicase
KO
K19789
DNA repair protein RadD
Organism
rhp
Rhodobacter xanthinilyticus
Brite
KEGG Orthology (KO) [BR:
rhp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rhp03400
]
LPB142_08600
DNA repair and recombination proteins [BR:
rhp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factor
LPB142_08600
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ResIII
Helicase_C
DEAD
UPF0547
AAA_30
SWI2_SNF2
Lipase_GDSL_2
AAA_22
DZR
DZR_2
Zn_Ribbon_1
Cas3-like_C_2
ATP-grasp_5
zf-Tbcl_FmdE
SLFN-g3_helicase
Zn-C2H2_12
Motif
Other DBs
NCBI-ProteinID:
AOZ69366
UniProt:
A0A1D9MBY7
LinkDB
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Position
1734287..1735975
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AA seq
562 aa
AA seq
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MRLRPRQKTFVERSVAALASRGNTLGVAPTGAGKTIMLSAVTGEMIGDGAKACVLAHRDE
LTAQNRAKFQRVVPGVATSVIDATEKSWGGQVAFAMVPTLARASNLADMPRLDLLVIDEA
HHAVADSYRRIIDRVREANPDARIFGVTATPNRGDRKGLREVFDNVADQVRLGELIASGH
LVPPRTFVIDVGVQDELRSVRKTMSDFDMAEVAGIMDRAPVTDEVIRHWKEKAGDRQTVV
FCSTVAHAEHVTEAFRAAGVSAALIHGDLSAETRKAILADYAAGAIRVVVNVAVLTEGWD
HPPTSCVVLLRPSSYKSTMIQMVGRGLRTVDPEEHPGIVKTDCVVLDFGTSSLIHGTLEQ
DVDLDGKSETGEAPTKTCPACEAEIPLAATECPLCGEAFPREDEEAGEGGGAAPLSGFMM
TEIDLLKRSSFAWVDLYGTDDALMATGFAAWGGIFWLDGVWYAIGGAKGERPHLLGVGER
TVCLAQADDWLNTHETDESAFKTRSWLRQPPTEKQLQYLPPECRHDFGLTRYRASALMTF
GFNKRAIRQLIDTAASPERRAA
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atgcgcctgcgcccccgccagaagaccttcgtcgagcgcagcgtggctgcgctcgcctcc
cgcggcaacacgctgggcgtggcgcccaccggtgcgggcaagaccatcatgctctcggcg
gtcaccggcgagatgatcggcgacggcgcgaaggcctgcgtgctggcgcatcgcgacgag
ctgacggcgcagaaccgcgccaagttccagcgcgtggtgccgggcgtcgccacatcggtc
atcgacgccaccgagaagtcctggggcggccaggtcgccttcgcgatggtgccaacgctg
gcgcgggcatcgaatctggccgacatgccgcgcctcgacctgctggtcattgacgaggcg
caccatgccgtcgccgacagctaccgccgcatcatcgaccgcgtgcgcgaagccaatccc
gacgcccgcatcttcggggtcacggcgacgccgaaccggggcgacaggaagggcctgcgc
gaggtcttcgacaacgtggccgaccaggtgcggctgggcgagttgatcgcctcgggccat
ctcgtgccgccgcgcaccttcgtcatcgacgtgggcgtgcaggacgagttgcggtccgtc
cgcaagaccatgtcggatttcgacatggcggaggtggcgggcatcatggaccgcgccccc
gtcaccgacgaggtgatccgccactggaaggaaaaggcgggcgaccggcagaccgtggtg
ttctgctccaccgtcgcccatgccgaacacgtcaccgaggcgttcagggcggcgggcgtt
tccgccgcgctgatccacggcgatctttcagccgagacccgcaaggcgatcctcgccgac
tacgcggcgggcgccatccgcgtcgtggtcaacgttgcggtgctgaccgagggctgggac
cacccgcccacctcatgcgtcgtgctgctgcggcccagctcctacaagtccacgatgatc
cagatggtcgggcgcggcttgcgcaccgtcgaccccgaggaacaccccggcatcgtcaag
accgattgtgtcgtgctggattttggcacttcgagcctgatccacggcactctggaacag
gatgtcgatctcgacggcaagtccgaaaccggcgaggcgccgaccaagacctgtcctgcc
tgcgaggcggaaatcccgctggccgccaccgaatgcccgctctgcggcgaggcgttcccg
cgggaggacgaagaggccggtgaaggcggtggtgccgcgccgctctcgggcttcatgatg
accgagatcgacctgctaaagcggtccagcttcgcctgggtcgacctttacggcacggac
gatgcgctgatggccacgggcttcgcggcctggggcggcatcttctggctggacggggtc
tggtacgccatcggcggggcgaagggcgaacgcccccatctgctgggcgtgggcgagcgc
accgtctgcctcgcgcaggccgacgactggctgaacacccacgagaccgacgagagcgcc
ttcaagactcgctcctggctgcgccagccgccgaccgaaaagcagcttcagtacctgccg
ccggagtgccgccatgacttcggcctgacgcgctaccgcgcctccgcgctgatgaccttc
ggcttcaacaagcgcgccatccgccagctgatcgacacggcggcctctcccgaacggagg
gcggcatga
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