Rhodobacter xanthinilyticus: LPB142_08790
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Entry
LPB142_08790 CDS
T04631
Name
(GenBank) murein L,D-transpeptidase
KO
K21470
L,D-transpeptidase YcbB
Organism
rhp
Rhodobacter xanthinilyticus
Brite
KEGG Orthology (KO) [BR:
rhp00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
rhp01002
]
LPB142_08790
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rhp01011
]
LPB142_08790
Peptidases and inhibitors [BR:
rhp01002
]
Cysteine peptidases
Family C82
LPB142_08790
Peptidoglycan biosynthesis and degradation proteins [BR:
rhp01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
LPB142_08790
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Gene cluster
GFIT
Motif
Pfam:
Scaffold
YkuD
PG_binding_1
Motif
Other DBs
NCBI-ProteinID:
AOZ69396
UniProt:
A0A1D9MC15
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All DBs
Position
1775470..1777080
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AA seq
536 aa
AA seq
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MFAGKGVRLGAAVLALTIALSPPVWSAQTALLDGYTQAIAEGAAEDRALAEFYAARNYAP
IWTTGADAVRRAALLGALENAAAHGLPAARYDAEGLRAAFEGLRSERERGLLEARMSRVF
LTYAHDISNGILEPAKVDPGIVREIPRADGRALLEGFVASGEGAAHYLHGLAPRAPQYAQ
LMKARYDLAGQIARGGWGAAVQASKLKPGDQGAAVVALRDRLQAMGYLGRTASAVYDADL
QKAVQQYQFDQGLTADGVAGAGTLEEINRAPEERMKSILVAMERLRWMNGLELGPRHVWV
NITDFSVKIIDHGKKTFESVTVVGQNQADRRTPEFSDEMEMMVINPSWSVPRSITVKEYL
PMMKKNPNAAGHISLVDSRGRTVPRSAVNFAAYNERNFPFAMKQPPSNSNALGLVKFLFP
NKYNIYLHDTPSKSLFQKEVRAYSHGCIRVGQPFDLAYALLAPQSADPEGEFQKVLKSGH
ETTVKLETPVPVHLVYFTAWPTVRGRMEYRRDVYGRDGALWAALAKAGVELQPVAD
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atgtttgcaggtaagggtgtgcggcttggtgccgcggtgctggctctgacgatcgcgctt
tcgccgccggtctggtcggcgcagactgcgctccttgacggctacacccaggcgatcgcg
gagggcgcggcggaagaccgggcgctcgccgagttctacgccgcccgcaattacgccccg
atctggacgacgggcgccgacgcggtgcgccgcgcggcgctgctcggcgcgcttgaaaac
gccgcggcccatggcctgccggcggcacggtatgatgccgaagggctgcgcgcggccttc
gaggggctgcgctcggagcgcgagcggggcttgctcgaggcgcggatgtcgcgcgttttc
ctgacctatgcccatgatatctcgaacggaattctcgagcccgcgaaggtcgacccgggg
atcgtgcgcgagatcccgcgcgcggatgggcgcgcgctcctcgagggctttgtcgcctcg
ggcgagggggcggcgcattatctgcatgggctggcgccccgggcgccgcaatatgcgcag
ctgatgaaggcgcgctatgatctggccggccagatcgcgcgcggcggctggggggcggcg
gtgcaggcctccaagctcaagcccggcgatcagggcgcggcggtggttgcgctgcgcgac
cggctgcaggcgatgggctatctcgggcgcacggcctcggccgtctatgacgccgatctg
caaaaggccgtgcagcaatatcagttcgatcagggcctcaccgccgatggcgtggcgggg
gcgggcacgcttgaggagatcaaccgcgcccccgaggagcggatgaaatcgatcctcgtc
gcgatggagcggctgcgctggatgaacgggctcgagctcgggccgcgtcacgtctgggtc
aatatcaccgatttctcggtcaagatcatcgaccacggcaagaagaccttcgaaagcgtc
accgtcgtcggccagaatcaggccgaccgccgcacgccggaattctccgacgagatggag
atgatggtgatcaacccgagctggtcggtgccgcgctccatcacggtcaaggaatacctg
ccgatgatgaagaagaacccgaacgccgcgggccatatctcgctcgtcgacagccgcggc
cgcacggtgccgcgctcggcggtgaatttcgccgcctataacgagcgcaacttccccttc
gcgatgaaacagccgccgtcgaattcgaacgcgctcggcctcgtgaagttcctcttcccg
aacaaatacaacatctacctgcacgacacgccgtcgaaatcgctcttccagaaagaggtg
cgcgcctatagccacggctgtatccgcgtcggccagcccttcgatctggcctatgcgctg
ctcgcgccgcaaagcgccgacccggagggcgagttccagaaggtgttgaaatcgggccat
gagacgacggtgaagctcgagacgccggtgccggtgcatctggtctatttcaccgcctgg
cccaccgtgcgcgggcggatggaatatcggcgcgatgtttatgggcgcgatggagcgctc
tgggcggcgctggcgaaagccggggtggaattgcagcccgtggcggattaa
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