Rhodobacter xanthinilyticus: LPB142_11200
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Entry
LPB142_11200 CDS
T04631
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
rhp
Rhodobacter xanthinilyticus
Pathway
rhp03420
Nucleotide excision repair
rhp03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
rhp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
LPB142_11200
03430 Mismatch repair
LPB142_11200
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rhp03400
]
LPB142_11200
Enzymes [BR:
rhp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LPB142_11200
DNA repair and recombination proteins [BR:
rhp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LPB142_11200
MMR (mismatch excision repair)
Other MMR factors
LPB142_11200
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
PcrA_UvrD_tudor
AAA_11
Motif
Other DBs
NCBI-ProteinID:
AOZ69816
UniProt:
A0A1D9MD85
LinkDB
All DBs
Position
complement(2299688..2302147)
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AA seq
819 aa
AA seq
DB search
MNGFDDAYEGALSLSARAMMAARGGEPGYLEGLNAAQREAVETLDGPVLMLAGAGTGKTK
ALTTRIAHLIHTGRARPNEILAVTFTNKAAREMKERVGRLLGGAIEGVPWLGTFHSVCVK
LLRRHAELVGLKANFTILDTDDQVRLLKQLILAANMDEKRWPARQLAGLIDGWKNRALTP
ERVRGAETAAFNNRGSELYAAYQERLVTLNAVDFGDLLLHMVTIFQTHADVLAQYQRWFR
YILVDEYQDTNVAQYLWLRLLAQGHRNICCVGDDDQSIYGWRGAEVGNILRFEKDFPGAA
VIRLEQNYRSTEHILAAASRLISGNEGRLGKTLWTEARGGEKVRLIGHWDGEEEARWIGE
EIEALAAGRRALGPVRLSDQAILVRASHQMRAFEDRFLSIGLPYRVIGGPRFYERLEIRD
AMAYFRLAVSPEDDLAFERVINTPKRGLGDKAQARIQSLARETGVGLLEAARLMVAEGEL
SGKAGGQLRQFVEAVDRWHAEIRAASPATAVTAAEDDELLIEPEEGGIAPANDHSHVRLA
ERILEESGYVEMWLNDKTPEAPGRLENLKELVKALEQFDNLQGFLEHVALIMDNDRDESG
DKVSIMTLHGAKGLEFPVVFLPGWEDGLFPSQRAMDETGQKGLEEERRLGYVGITRAERL
CTISFAGNRRVYGQWQSQLPSRFIDELPAADVEVLTPPGLYGGGFGAAGAYGGAGAGFSG
GSRLEERAGRADVYNSPGWKRLQAQGGQSAAPARRGAQVFDADAEDFEIGERVFHKKFGY
GRVVATEGDKLVVDFEKAGEKKLLASFVVPAAQAGEVPF
NT seq
2460 nt
NT seq
+upstream
nt +downstream
nt
atgaacgggtttgatgacgcatatgagggggcgctgagtctctccgcgcgcgcgatgatg
gcggcgcggggcggcgagcccggctatctcgaggggctgaacgcggcgcagcgggaggcg
gtggagacgctggacgggccggtcttgatgcttgcgggcgcgggcaccggcaagaccaag
gcgctcaccacgcggatcgcgcatctgatccataccgggcgggcgcggcccaatgagatc
ctcgcggtgaccttcaccaacaaggccgcccgcgagatgaaggagcgggtcgggcggctc
ttgggcggcgcgatcgagggggtgccgtggctcggcaccttccactcggtctgtgtgaag
ctcttgcgccgtcatgccgagctcgtggggttgaaggcgaatttcaccattctcgatacc
gatgatcaggtgcggctgctcaagcagttgatcctggccgcgaacatggatgaaaagcgc
tggcccgcgcgccagcttgccgggctgatcgatggctggaagaaccgcgcgctgacgccg
gagcgggtgcgcggcgcggagacggccgcgttcaacaaccgcggctcggagctctacgcg
gcctatcaggagcggctggtgacgctcaatgcggtcgatttcggcgacctgctcttgcat
atggtcacgatcttccagacccatgccgatgtgctcgcgcagtatcagcgctggttccgt
tatatcctcgtcgacgagtatcaagacaccaatgtcgcgcaatatctctggctgcggctc
ttggcgcaggggcatcgcaacatctgttgcgtgggcgatgatgaccagtcgatctatggt
tggcgcggtgccgaggtgggcaatatcttgcggttcgagaaggattttccgggcgcggcg
gtgatccggctcgagcagaattaccgctcgacggagcatattctggccgccgcctcgcgg
ttgatttcgggcaatgaggggcggcttggcaagacgctctggaccgaggcgcgcggcggc
gagaaggtgcggctgatcggccattgggatggcgaggaggaggcgcgctggatcggcgag
gagatcgaggcgctggcggcggggcggcgcgcgctcgggccggtgcggctctccgatcag
gcgatcctggtgcgcgcgagccatcagatgcgcgccttcgaggaccggttcctgtcgatc
gggctgccgtaccgggtgatcggggggccgcggttctatgagcggctcgagatccgcgac
gcgatggcctatttccgcctcgcggtcagcccggaggatgatctggccttcgagcgggtg
atcaacacgcccaagcgcggccttggcgacaaggcgcaggcgcgcatccagagccttgcg
cgcgagaccggcgtcgggcttttggaggcggcgcggctgatggtggccgagggcgagctc
tccggcaaggcgggcgggcagttgcgccagttcgtcgaggcggtggaccgctggcatgcc
gagatccgcgcggcctcgcccgccaccgcggtgacggcggcggaggatgatgagctcctg
atcgagcccgaggagggcggcatcgcgccggccaacgaccattcgcatgtgcgcctcgcc
gagcggatcctggaggaatcgggctatgtcgagatgtggctcaacgacaagacgccggag
gcgccggggcggctcgagaacctgaaggaactcgtcaaggccctggaacaattcgataat
ctccagggcttcctcgagcatgtcgcgttgatcatggacaatgaccgcgacgagagcggc
gacaaggtctcgatcatgacgctgcatggcgccaaggggctcgagtttccggtggtgttc
ttgccgggctgggaggacgggctcttccccagccagcgcgcgatggacgagaccgggcag
aaggggctcgaggaggagcgccggctcggctatgtcggcatcacccgcgccgagcggctt
tgcacgatctccttcgcgggcaaccgccgggtctatggccagtggcaaagccagctgccc
tcgcggttcatcgatgagctgccggcggccgatgtcgaggtgctgacgccgcccgggctt
tacggcggcggctttggcgcggcgggggcctatggcggcgcgggggcggggttttcgggc
ggctcgcggctcgaggagcgggccgggcgggccgatgtctacaattcgccgggctggaaa
cgcttgcaggcgcagggcggccagagcgccgccccggcgcggcgcggcgcgcaggtgttt
gacgccgatgccgaggatttcgagatcggcgagcgggtgtttcacaagaaattcggctac
gggcgcgtggtggcgaccgagggcgacaagctcgtcgtcgatttcgagaaggcgggggag
aagaagcttctggcctccttcgtggtgccggccgcgcaggcgggcgaggtgccgttctga
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