Rhodobacter xanthinilyticus: LPB142_11250
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Entry
LPB142_11250 CDS
T04631
Name
(GenBank) exodeoxyribonuclease VII large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
rhp
Rhodobacter xanthinilyticus
Pathway
rhp03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
rhp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
LPB142_11250
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rhp03400
]
LPB142_11250
Enzymes [BR:
rhp01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
LPB142_11250
DNA repair and recombination proteins [BR:
rhp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
LPB142_11250
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
Gly_transporter
RecJ_OB
Motif
Other DBs
NCBI-ProteinID:
AOZ69825
UniProt:
A0A1D9MD77
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All DBs
Position
complement(2310634..2312187)
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AA seq
517 aa
AA seq
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MDLLDDTTGSNAHDYTVSEISGAVKRVIEGEFGRVRVRGEVGRVSRPGSGHLYFDLKDDR
SVIAAVSWKGQVARMAVRPEEGMEVIATGKLTTFPGQSKYQLIVDEVEPAGAGALMAMLE
ARRRALAAEGLFEAGRKQPIPFLPEVIGVVTSPSGAVIRDILHRLRDRFPRRVLIWPVAV
QGQACAPEVTAAIRGFNALAPGGAVPRPDLIIVARGGGSLEDLWGFNEESVVRAAAESAI
PLISAVGHETDTTLIDFAADRRAPTPTAAAEMAVPVRAELAARLAEAEARMARAARGRIE
RNGQRMADLSRALGRPETLIAPARQRFDLMSDRLAPALRMVSTRKRAAFAPLAALIGPQI
LARFMRHERDRLAGLSGRLAPALARNRAEAARMNARNRAALEGLAERLARAPEARLAALA
ERLARLDRMRQTLGYTETLRRGYAVVRGAPGLITARAQAAAAGALEIEFHDGRIGAQTTE
SPPPPAAPPAPEASPAPKTARAKPPRKDTPPEQGSLF
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atggaccttctcgacgatacaaccggctcaaacgcccatgattacaccgtttcggagatt
tccggcgcggtgaaacgggtgatcgagggcgagtttggccgcgtgcgggtgcgcggcgag
gtcgggcgggtcagccggccgggctcggggcatctctatttcgacctcaaggatgaccgc
tcggtgatcgcggcggtgagctggaagggccaggtcgcgcggatggcggtgcgccccgag
gaggggatggaggtgatcgccaccggcaagctcaccaccttcccgggccagtcgaaatat
cagctgatcgttgatgaggtggagcccgccggcgcgggcgccttgatggcgatgctcgag
gcgcgccgccgtgcgctcgccgccgaagggctcttcgaggcggggcgcaaacagccgatc
ccgtttctgcccgaggtgatcggggtggtgacctcgccctcgggggcggtgatccgcgat
atcctgcaccggctgcgcgaccggtttccgcgccgcgtgctgatctggccggtggcggtg
caggggcaggcctgcgcgcccgaggtgacggccgcgatccgcggcttcaacgcgctcgcg
cccggcggcgcggtgccgcggccggacctcatcatcgtggcgcgcggcggcggctcgctc
gaggatctgtggggcttcaacgaggaaagcgtggtgcgcgcggcggccgagagcgcgatc
ccgctgatctcggcggtggggcatgagaccgatacgaccttgatcgatttcgccgccgac
cggcgcgcgccgaccccgacggcggcggccgaaatggcggtgccggtgcgcgcggaactg
gccgcgcggctggccgaggcggaggcgcggatggcgcgggcggcgcgcgggcgcatcgag
cgcaatggtcagcggatggcggatctctcccgcgcgctcggccgccccgagacgctgatc
gcaccggcgcggcaacggtttgacctgatgtcggatcgtttggcgcccgcgctgcggatg
gtctcgacgcgcaaacgcgcggcctttgcgccgcttgccgcgctgatcgggccgcagatt
ctggcgcgcttcatgcgccatgagcgcgaccggctcgctgggctctcggggcggctcgcg
cctgcgctcgcgcgcaaccgcgccgaggccgcgcggatgaatgcgcgcaaccgcgccgcg
ctcgaggggcttgccgagcggctcgcgcgcgcccccgaggcgcggctcgcggcgctggcc
gagcggctcgcgcggcttgatcggatgcgccagacgctcggctataccgagacgctgcgg
cgcggctatgcggtggtgcgcggcgcgccggggctgatcaccgcgcgcgcacaggccgcc
gccgccggggcgctcgagatcgaattccacgatggccggatcggcgcgcaaacgaccgaa
agcccgccgccgcccgccgcccccccggcccccgaggcgagccccgcgccaaaaaccgcc
cgcgcgaagcccccgcgcaaggacacgccgcccgaacagggctcactcttctga
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