Rhodobacter xanthinilyticus: LPB142_11670
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Entry
LPB142_11670 CDS
T04631
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
rhp
Rhodobacter xanthinilyticus
Pathway
rhp03030
DNA replication
rhp03430
Mismatch repair
rhp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rhp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LPB142_11670
03430 Mismatch repair
LPB142_11670
03440 Homologous recombination
LPB142_11670
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rhp03032
]
LPB142_11670
03400 DNA repair and recombination proteins [BR:
rhp03400
]
LPB142_11670
Enzymes [BR:
rhp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LPB142_11670
DNA replication proteins [BR:
rhp03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LPB142_11670
DNA repair and recombination proteins [BR:
rhp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LPB142_11670
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DNA_pol_A_exo1
PAS_8
PAS_4
DEDDh_C
PAS
PAS_9
Motif
Other DBs
NCBI-ProteinID:
AOZ69899
UniProt:
A0A1D9MDT3
LinkDB
All DBs
Position
complement(2393471..2395564)
Genome browser
AA seq
697 aa
AA seq
DB search
MSLAGLSLRLRIFLFFAALALGNVAALVAGLVYGYTKLGEPDLLDGFLIGGTVAGFVIFG
LVVAVWFLFDENVAKPIERLAGGMRARTHAEVVAELDQTAGRYLGDLAPAAAAVTQHLAE
TRSALTEAVQRETTRLAREKERLEALLSDVPVGVLLCTADHQLVFYNGQAVDLLGGAHAP
GLDRRVFDYLHQPPISHAYARLIETDDPDAASDLLCATTADGKVLAARMRLLSEGEDHHL
TARPGYVLTLRDVSGDMRAHASREQLMDELFDRIRRPAAALQSLTGVLTADDGPTGAARD
RVREAARSEAAHLAQAIHTLFERHEQNRADWWPLAMIRASDLGEAVRARVEAEGGALLAV
AAPLMLRCEGFEMVALLAGLAARLEGRSDLRLEISEDGAGAMIALEWTGAPVAIGALERW
LDAPLETGLAGVTGRSVLVSHASEIWPERLGEGRARLCIPLREARRSVKRPKPVPRKVVY
DFDLLGQSREAEFAATPLERLTYVVFDTETTGLLPSEGDEIVQIAAVRIVNGRRVESEVF
DTLVNPGRRIPPASTEIHGISDAMVEDAPDIVDVGRRFHKFVEGAVLVAHNAPFDMEFLR
RKELAIGLNFDNPILDTVLLSAVVFGQSETHSLDALTHRLGITIPEEARHTAIGDTVATA
DAFLKLMPALKARGLATFGDVVAEVRKHGRLIKDLNG
NT seq
2094 nt
NT seq
+upstream
nt +downstream
nt
atgagcctcgccggtctgagcctgcggctgcgtatcttcctgttcttcgccgcgctcgcg
cttggcaatgtcgccgcgctcgtggcggggctcgtctatggttacaccaagctcggcgag
cccgatctgctcgacggtttcctgatcggcggcacggtggcgggcttcgtgatcttcggc
ctcgtcgtcgcggtctggttcctcttcgacgaaaacgtcgccaagccgatcgagcggctc
gccggggggatgcgcgcgcgcacccatgccgaggtggtggccgagctcgaccagaccgcc
gggcgctacttgggcgatctcgccccggcggcggcggcggtgacgcagcatctggccgag
acccgctcggcgctcaccgaggcggtgcagcgcgaaaccacccgccttgcgcgcgagaag
gagcggctcgaggcgctcctgtcggatgtgccggtcggcgtgctgctgtgcacggccgat
catcagctcgttttctacaacggccaggcggttgatcttctcggcggcgcccatgcgccc
gggcttgatcggcgggtgttcgattacctccaccagccgccgatttcccacgcctatgcg
cggctgatcgagaccgacgacccggatgcggcctcggatctgctctgcgccaccaccgcc
gacggcaaggtgcttgccgcgcggatgcggcttttgtcggagggcgaggatcatcatctg
accgcgcggccgggctatgtgctgaccttgcgcgatgtctcgggcgacatgcgcgcgcat
gcgagccgcgagcagctgatggatgagcttttcgaccggatccgccggcctgcggcggcg
ctgcaatcgctcactggggtgctgaccgccgatgacggcccgacgggcgccgcgcgcgat
cgggtgcgcgaggccgcgcgcagcgaggccgcccatctcgcgcaggcgatccacacgctc
ttcgagcgccacgagcagaaccgcgccgattggtggccgctcgcgatgatccgggcctcc
gatctcggcgaggcggtgcgcgcgcgggtcgaggccgaggggggggcgctgctcgcggtc
gccgcgcccttgatgcttcgctgcgaaggctttgaaatggttgcgcttttggccggcctc
gcggcgcggctcgagggtcggagcgacctgcgtctcgagatttccgaggatggcgcgggg
gcgatgatcgcgctcgaatggaccggcgcgccggtcgcgatcggcgcgctcgagcgctgg
ctcgatgcgccgctcgagaccgggcttgccggtgtcaccgggcgcagcgtgctggtcagc
catgccagcgaaatctggcccgagcggcttggcgaggggcgcgcgcggctgtgcatcccg
ctgcgcgaggcgcgccgctcggtcaagcgcccgaaaccggtgccgcgcaaggtggtctat
gatttcgacctgctcggccaatcgcgcgaggcggaattcgccgcaaccccgctcgagcgg
ctcacctatgtcgtcttcgataccgaaacgacggggcttttgccctcggagggcgacgag
atcgtgcagatcgccgcggtgcggatcgtgaacggccggcgcgtcgagagcgaggtcttc
gacacgctcgtcaaccccgggcggcggatcccgccggcctcgaccgagatccacgggatc
tccgatgcgatggtcgaggacgccccggatattgtggatgtcggtcggcggttccacaaa
ttcgtggaaggcgcggtgctggtcgcgcataacgcgcccttcgatatggagttcctgcgg
cgcaaggaactcgccatcgggctcaatttcgacaacccgatcctcgacacggtgctgctc
tcggcggtggtcttcggccaatccgaaacccatagcctcgacgcgctgacccatcggctc
ggcatcaccatccccgaggaggcgcgccacaccgcgatcggcgatacggtggcgacggcg
gatgcgtttctcaagctgatgccggccttgaaggcgcgcgggctggcgacctttggcgat
gtggtggccgaggtgcgcaagcacgggcggctgatcaaggatctgaacggctga
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