Rhodobacter xanthinilyticus: LPB142_12430
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Entry
LPB142_12430 CDS
T04631
Name
(GenBank) tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
rhp
Rhodobacter xanthinilyticus
Brite
KEGG Orthology (KO) [BR:
rhp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rhp03016
]
LPB142_12430
Enzymes [BR:
rhp01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
LPB142_12430
Transfer RNA biogenesis [BR:
rhp03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
LPB142_12430
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
TraT
Motif
Other DBs
NCBI-ProteinID:
AOZ70027
UniProt:
A0A1D9MDT6
LinkDB
All DBs
Position
complement(2546682..2548007)
Genome browser
AA seq
441 aa
AA seq
DB search
MSESPKKLHIKTYGCQMNVYDSERMAEAMGAKGYELTDDPAEADMVLLNTCHIREKAAEK
VYSDLGRLRPFKEARPDLKIGVAGCVAQAEGAEIMRRMPLVDLVVGSQNYHRLPEMVAAA
EQGARPVDTEFPLEDKFDHLPERPLAARPTAFLTVQEGCDKFCAFCVVPYTRGAEVSRPA
ARILAEAQKLVDKGVREITLLGQNVNGYHGAGEGGDWGLARLVRALARIDGLERIRYTTS
HPNDMDDALIAAHGEEPKLMPYLHLPVQSGSDRVLKAMNRKHTAEDYLRLVERIRAARPD
IMLSSDFIAGFPGESDEDHRATLDLIAAVGYGAAFSFKYSPRPGTPAAGRAGVAPEVADA
RLQELQALITAQQRAAQEGMVGREVGVLFEKPGRLEGQWVGKSDYLQAVHVRGAGLAPGV
LAQVRITESGPNSLGGELVAG
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atgtcggagagcccgaagaagctgcatatcaagacctatggctgtcagatgaacgtctat
gacagcgagcgcatggccgaggcgatgggcgcgaagggctatgagctgaccgatgatccg
gccgaggcggatatggtgctgctcaacacctgccatatccgggagaaggccgccgagaag
gtctattccgatctcggccggctgcggccgttcaaggaggccaggcccgatctcaagatc
ggcgtggcgggctgcgtggcgcaggccgagggggcggagatcatgcgccggatgccgctc
gtcgatctggtggtgggctcgcagaattatcaccgcctgcccgagatggtggcggcggcc
gagcagggcgcgcggcccgtcgataccgaattcccgctcgaggacaagttcgaccacctg
cccgagcgcccgctcgcggcgcgcccgacggcgtttctgacggtgcaggagggctgcgac
aagttctgcgccttttgcgtcgtgccctatacccgcggggccgaggtctcgcggccggcg
gcgcggatcctagcggaggcgcaaaagctcgtcgacaagggggtgcgcgagatcacgctt
ctggggcagaacgtcaacggctatcacggcgcgggcgagggcggcgattggggccttgcg
cggctcgtgcgggcgctggcgcgcatcgacgggctcgagcggatccgctacacgacctcg
caccccaacgacatggatgacgcgctgatcgcggcgcatggcgaggagcccaagctcatg
ccctatctgcatctgccggtgcaatcgggctcggaccgggtgctcaaggcgatgaaccgc
aagcataccgccgaggactatctgcgccttgtcgagcggatccgggcggcgcggcccgac
atcatgctcagctcggatttcatcgcgggtttccccggcgagagcgatgaggaccaccgc
gcgacgctcgatctgatcgcggcggtgggctatggcgcggcgttctcgttcaaatattcg
ccgcggccgggcacgccggcggccgggcgggcgggcgtggcgcccgaggtggccgatgcg
cggctgcaggagttgcaggcgctgatcaccgcccagcagcgcgccgcgcaggaggggatg
gtgggccgcgaggtcggcgttctgttcgaaaaacccggccggctcgaggggcaatgggtc
gggaaatccgattatcttcaagcggttcatgtccgcggcgcggggcttgcgccgggggtg
ctcgcgcaggtgagaatcaccgaaagcgggccgaattcgctgggcggcgagctggtcgcg
ggctga
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