Rhodobacter xanthinilyticus: LPB142_13930
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Entry
LPB142_13930 CDS
T04631
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
rhp
Rhodobacter xanthinilyticus
Pathway
rhp03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
rhp00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
LPB142_13930
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rhp03021
]
LPB142_13930
03400 DNA repair and recombination proteins [BR:
rhp03400
]
LPB142_13930
Enzymes [BR:
rhp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
LPB142_13930
Transcription machinery [BR:
rhp03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
LPB142_13930
DNA repair and recombination proteins [BR:
rhp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
LPB142_13930
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_3
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
RnfC_N
Motif
Other DBs
NCBI-ProteinID:
AOZ70285
UniProt:
A0A1D9MEH4
LinkDB
All DBs
Position
complement(2847787..2851923)
Genome browser
AA seq
1378 aa
AA seq
DB search
MAHAYVGQKRIRRYYGKIREVLEMPNLIEVQKASYDLFLRSGEAEKPLDGEGLQGVFQSV
FPIKDFNDNAILEFVKYELEKPKYDVDECMSRDLTYSAPLKVTLRLIVFDVDEITGARSV
KDIKEQDVFMGDMPLMTPNGTFIVNGTERVIVSQMHRSPGVFFDHDRGKTHSSGKLLFAC
RIIPYRGSWLDFEFDAKDLVFARIDRRRKLPVTTLLYALGLDQEGIMSAYYNTVTYRAEG
KRGWVTKFFPERVRGTRPTYDLIDAATGEVILKAGEKATPRMVKKWIDEAKVSELMVPFE
QILGRYCARDIINERTGYIYIEAGEELTADYDKEGQLSGGSIKTLLDNGITEVPVLDIDN
VNVGPYIRNTMAADKNWNRDSALMDIYRVMRPGEPPTVEAASTLFDTLFFDSERYDLSAV
GRVKMNMRLDLDAPDTQRTLRREDIIACIKGLVELRDGKGEIDDIDHLGNRRVRSVGELM
ENQYRVGLLRMERAIKERMSSVEIDTVMPQDLINAKPAAAAVREFFGSSQLSQFMDQTNP
LSEVTHKRRLSALGPGGLTRERAGFEVRDVHPTHYGRMCPIETPEGQNIGLINSLATFAR
VNKYGFIETPYRRVTDSKVTDEVVYMSATEEMRHTVAQANAQLDADGKFVNDLVSTRQSG
EFMLNPPEAVDLIDVSPKQLVSVGAALIPFLENDDANRALMGANMQRQAVPLLRAEAPYV
GTGMEAVVARDSGAAIMAKRGGIVDQVDASRIVIRANEDLGMGDAGVDIYRLRKFKRSNQ
SSTINQRPIVKVGDIVSKGQVVADGPSTDQGELALGRNVVVAFMPWNGYNYEDSILISER
IHRDDVFTSIHIEEYEVAARDTKLGPEEITRDIPNVGEEALRNLDEAGIVYIGAEVGPGD
ILVGKITPKGESPMTPEEKLLRAIFGEKASDVRDTSLRLPPGAYGTIVEVRVFNRHGVDK
DERALQIEREEVERLARDRDDELAILERNIYARLKTLILGKVAVKGPKGIKAGSEITEEL
LGTLSRGQWWQLALENEGDAKEVEALNDQFDAQKRALELRFEDKVEKVRQGDDLPPGVMK
MVKVFVAVKRKLQAGDKMAGRHGNKGVVSKVVPMEDMPFLADGTPVDLVLNPLGVPSRMN
VGQILETHMGWAARGLGIQIDEALKEYRRSGDLTPVREAMRHGYGDDTYEDAFAAMEEER
FVECAEQVRTGVPIATPVFDGAKEADINDALKRAGFDQSGQSEVFDGRTGEKFARKVTVG
VKYFLKLHHLVDDKMHARSTGPYSLVTQQPLGGKAQFGGQRLGEMEVWALEAYGAAYTLQ
EMLTVKSDDVAGRTKVYESIVKGEDNFEAGVPESFNVLVKEVRGLGLNMELLDAEDEE
NT seq
4137 nt
NT seq
+upstream
nt +downstream
nt
atggctcacgcatacgttggtcagaagcgtatccgccgctattacggcaaaatccgcgaa
gtccttgaaatgccgaacctcatcgaggttcagaaagcttcctacgatctgttcctgcgg
tcgggcgaggctgagaagccgctcgatggcgaggggctgcagggcgtcttccaatcggtg
ttcccgatcaaggatttcaacgacaacgcgattctcgaattcgtcaaatacgagctcgag
aagccgaaatacgatgtcgacgaatgcatgagccgcgacctgacctattcggcgccgctc
aaggtgacgctgcgtctgatcgtgttcgatgtcgatgagatcaccggcgcgcgctcggtc
aaggacatcaaggaacaggacgtgttcatgggcgacatgccgctcatgacgccgaacggc
accttcatcgtcaacggcaccgagcgggtcatcgtctcgcagatgcaccgctcgccgggc
gtgttcttcgaccatgaccgcggcaagacccattcctcgggcaagctcctgttcgcctgc
cggatcatcccctaccgcggctcgtggctcgacttcgaattcgacgcgaaagacctggtc
ttcgcgcgcatcgaccgtcgccgcaaactgccggtgaccacgctcctctatgcccttggt
ctcgaccaggaaggcatcatgagcgcctattacaacaccgtgacctatcgcgccgagggc
aagcgcggctgggtgacgaaattcttccccgagcgcgtgcgcggcacccgcccgacctat
gatctgatcgacgccgccaccggcgaagtgatcctcaaggccggcgagaaagccaccccc
cggatggtgaagaaatggatcgacgaggccaaggtctcggagctcatggttcccttcgag
cagatcctcggccgctactgcgcgcgcgacatcatcaacgagcgcaccggctatatctac
atcgaggcgggcgaagagctcaccgccgattacgacaaagagggccagctctcgggcggc
tcgatcaagacgctgctcgacaacggcatcaccgaagtgccggtgctcgatatcgacaac
gtcaatgtcggcccctacatccgcaacaccatggccgcggacaagaactggaaccgcgac
tcggcgctgatggatatctaccgcgtcatgcgtccgggcgagccgccgaccgtcgaggcc
gcctcgacgctcttcgacacgctgttcttcgatagcgagcgctatgatctctcggccgtc
ggccgggtgaagatgaacatgcgcctcgacctcgacgcgcccgacacccagcgcacgctg
cgccgcgaagacatcatcgcctgcatcaagggcctggtggagctgcgcgacggcaagggc
gagatcgacgacatcgaccacctcggcaaccgccgggtgcgctcggtcggcgagctgatg
gagaaccagtatcgcgtcggcctgctgcgcatggaacgcgcgatcaaggaacgcatgtcc
tcggtcgagatcgacacggtgatgccgcaggatctgatcaacgcgaaaccggccgcggcc
gcggtgcgcgaattcttcggctcctcgcagctgtcgcagttcatggaccaaaccaacccg
ctctcggaagtcacccacaagcgccgtctctcggcgctcgggccgggcggtctgacccgc
gagcgcgcgggcttcgaggttcgcgacgttcacccgacccactacggccggatgtgcccg
atcgaaacgccggaaggtcagaacatcggtctgatcaactcgctcgcgaccttcgcgcgc
gtgaacaaatacggcttcatcgagaccccctatcgccgcgtgaccgacagcaaggtcacc
gatgaagtggtctacatgtcggccaccgaagagatgcgccacaccgtcgctcaggcgaac
gcgcagctcgatgcggatggcaaattcgtcaacgacctggtttcgacccgtcagtcgggc
gaattcatgctcaacccgcccgaagcggtggatctgatcgacgtgtcgccgaaacagctg
gtttcggtcggggcggcgctcattcccttcctcgaaaacgacgacgccaaccgcgctctg
atgggtgcgaacatgcaacgtcaggcggttccgctgctgcgcgccgaggcgccctatgtc
ggcaccggcatggaagcggtcgtggcgcgcgattcgggcgcggcgatcatggccaagcgc
ggcgggatcgtggatcaggtcgatgcgagccggatcgttatccgcgcgaacgaagatctg
ggcatgggcgatgcgggcgtcgatatctatcgtctgcgcaagttcaagcgctcgaaccaa
tcctcgacgatcaaccaacgtccgatcgtcaaggtgggcgatatcgtctccaagggccag
gtcgtggccgatggcccgtcgaccgatcagggcgagctcgcgctcggccggaacgtggtc
gtggccttcatgccctggaacggctacaactacgaagactcgatcctgatctccgagcgg
atccaccgcgacgacgtcttcacctcgatccatatcgaggaatatgaagtcgccgcccgc
gataccaagctcgggccggaagagatcacccgcgatatcccgaacgtcggcgaggaagct
ctgcgcaacctcgacgaggcgggcatcgtctatatcggtgccgaagtcggcccgggcgat
atcctcgtgggcaagatcaccccgaagggcgaaagcccgatgacgccggaagaaaagctc
ctccgcgcgatcttcggcgagaaggcctccgacgtgcgcgatacctcgctgcgtctgccg
cccggtgcctatggcacgatcgtcgaagtgcgggtcttcaaccgtcacggcgtcgacaag
gacgagcgtgcgctgcagatcgagcgcgaagaggtcgaacgtctggcgcgtgaccgcgac
gacgaactcgcgatcctcgagcgcaacatctatgcgcgtctgaagacgctgatcctcggc
aaggtcgcggtgaagggtccgaagggcatcaaggccggttcggagatcactgaggagctg
ctcggcacgctgtcgcgtggccagtggtggcagctcgcgctcgaaaacgagggcgatgcc
aaggaagtcgaagcgctgaacgaccagttcgacgcccagaagcgcgcgcttgagctgcgt
ttcgaggacaaggtcgagaaggtccgtcagggcgacgatctgcctccgggcgtgatgaag
atggtcaaggtcttcgtcgcggtgaagcgcaagctgcaagccggcgacaagatggcgggc
cgtcacggcaacaagggcgtggtgtcgaaagtcgttccgatggaggacatgcccttcctc
gccgacggcaccccggtcgacctcgttctcaacccgctcggcgtgccgtcgcggatgaac
gtcgggcagatcctcgagacccacatgggctgggccgcgcgcggcctcggcatccagatc
gacgaggctctgaaagagtatcgccgctcgggcgatctgacgcccgtacgcgaggcgatg
cgccacggctatggcgacgacacctacgaggacgccttcgccgcgatggaggaggagcgc
ttcgtcgaatgtgccgaacaggtccgcaccggcgtgccgatcgcgaccccggtcttcgac
ggcgccaaggaagccgacatcaacgacgcgctcaaacgcgcgggcttcgaccaatcgggc
cagtcggaggtcttcgacggccgcaccggcgagaaattcgcccgcaaggtcaccgttggg
gtcaagtacttcctcaagctgcaccacctcgtcgacgacaagatgcacgcccgctcgacc
ggcccgtattcgctcgtcacccagcagccgctgggcggtaaggcgcagttcggcggtcag
cgtctgggggaaatggaggtctgggctctcgaggcttacggcgccgcctataccctgcag
gagatgctgacggtgaagtcggacgacgtggccggccggacgaaagtctacgagtcgatc
gtcaagggcgaggacaatttcgaggccggcgtgccggaatcgttcaacgttctcgtcaaa
gaggtccggggcctcggcctcaacatggaactcctggatgcggaggacgaggagtga
DBGET
integrated database retrieval system
