Rhodobacter xanthinilyticus: LPB142_14075
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Entry
LPB142_14075 CDS
T04631
Name
(GenBank) succinyl-diaminopimelate desuccinylase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
rhp
Rhodobacter xanthinilyticus
Pathway
rhp00300
Lysine biosynthesis
rhp01100
Metabolic pathways
rhp01120
Microbial metabolism in diverse environments
rhp01230
Biosynthesis of amino acids
Module
rhp_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
rhp00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
LPB142_14075
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
rhp01002
]
LPB142_14075
Enzymes [BR:
rhp01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
LPB142_14075
Peptidases and inhibitors [BR:
rhp01002
]
Metallo peptidases
Family M20
LPB142_14075
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Peptidase_M28
Motif
Other DBs
NCBI-ProteinID:
AOZ71089
UniProt:
A0A1D9MH49
LinkDB
All DBs
Position
complement(2877739..2878887)
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AA seq
382 aa
AA seq
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MTHAPIDPVALTAALIRCPSVTPVEGGALELLARVLGEAGFACTRVDRNGVPNLFARWGA
KGARSFGFNGHTDVVPVGDVAAWSRDPFGAEIAEGQIWGRGASDMKSGVAAFVAAAVDFV
RETPPEGAVILTITGDEEGPGRDGTRALLDWMAAEGEAMSVCLVGEPTCPERMGEMMKIG
RRGSMTFYIEAEGVQGHAAYPHRAKNPLHALTRLLGEMTAAPLDQGTAHFEPSSLQITTI
DCANPANNVIPARATATVNIRFNDAHSGAGLVAWGEGLAARIEAETGVRLTLRSEISGES
FVTPPGAFVALVAAAVEAETGLRPELSTTGGTSDARFVKDHCPVLEFGLVGQTMHKVDER
VEIAHIHQLKAIYARALRAFFA
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atgacccatgccccgattgatccggtcgcgctgaccgccgcgctgatccgctgcccgagt
gtcacgcccgtcgagggcggcgcgctcgagcttctcgcgcgggtgctgggcgaggccggg
ttcgcctgcacccgggtcgatcgcaacggcgtgcccaacctcttcgcgcgctggggggcg
aagggcgcgcgcagcttcggcttcaacggccataccgatgtcgtgccggtgggcgatgtc
gccgcctggagccgcgacccgttcggcgccgagatcgccgagggccagatctggggccgc
ggcgcgagcgacatgaaatcgggcgtggcggcctttgtcgcggcggcggtggatttcgtg
cgtgagaccccgcctgagggcgcggtgatcctgaccatcaccggcgatgaagagggcccg
ggccgcgacggcacgcgcgcgctgctcgactggatggcggccgagggcgaggcgatgtcg
gtctgtctcgtgggcgagccgacctgccccgagcggatgggcgagatgatgaagatcggc
cggcgcggctcgatgaccttctatatcgaggccgagggggtgcaggggcacgcggcctat
ccgcaccgggcgaagaacccgctccatgcgctcacccggctcctgggcgagatgaccgct
gcgccgctcgatcagggcaccgcgcatttcgagccctcgagcctgcagatcaccacgatc
gattgcgccaacccggccaataacgtgatcccggctcgggccacggcgacggtcaatatc
cgcttcaacgatgcccatagcggcgcggggctcgtggcctggggcgaggggctcgcggcg
cggatcgaggccgaaaccggcgtgcggctcacgctgcgctcggaaatctcgggcgagagc
ttcgtcacgccgccgggcgcgttcgtcgcgctcgtcgccgccgccgtcgaggccgagacc
ggcctgcgccccgagctctccaccaccggcggcacctcggacgcgcgcttcgtcaaggac
cattgcccggtgctcgaattcggcctcgtcggccagaccatgcacaaggtcgatgaacgc
gtcgagatcgcccatatccaccagctcaaggcgatctatgcccgcgcgcttcgggcgttc
ttcgcatga
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