Rhodobacter xanthinilyticus: LPB142_14810
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Entry
LPB142_14810 CDS
T04631
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
rhp
Rhodobacter xanthinilyticus
Pathway
rhp03030
DNA replication
rhp03430
Mismatch repair
rhp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rhp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LPB142_14810
03430 Mismatch repair
LPB142_14810
03440 Homologous recombination
LPB142_14810
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rhp03032
]
LPB142_14810
03400 DNA repair and recombination proteins [BR:
rhp03400
]
LPB142_14810
Enzymes [BR:
rhp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LPB142_14810
DNA replication proteins [BR:
rhp03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LPB142_14810
DNA repair and recombination proteins [BR:
rhp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LPB142_14810
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_gamma3
DNA_pol3_delta2
DUF3646
DNAX_ATPase_lid
AAA
AAA_30
AAA_22
RuvB_N
AAA_19
AAA_5
AAA_14
AAA_16
TIP49
AAA_18
SLFN-g3_helicase
AAA_assoc_2
ResIII
AAA_24
Glyco_tranf_2_5
DUF815
TsaE
Rad17
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
AOZ70444
UniProt:
A0A1D9MEZ7
LinkDB
All DBs
Position
3031787..3033559
Genome browser
AA seq
590 aa
AA seq
DB search
MSDTPATGYQVLARKYRPATFADLIGQEAMVRTLKNAFAASRIAQAFIMTGIRGTGKTTT
ARIIAKGLNCVGADGQGGPTTEPCLVCEHCRAIAEGRHVDVMEMDAASRTGVGDIREIIE
SVHYRAASARYKVYIIDEVHMLSTSAFNALLKTLEEPPAHVKFIFATTEIRKVPVTVLSR
CQRFDLKRIEPEVMMAHLARIAGLESAHLAPDALALITRAAEGSVRDAMSLLDQAIAHGA
GETTAEQVRAMLGLADRARVLDLFDMILKGDAAGALTELGSQYSDGADPMAVLRDLTEIT
HWVSVIKITPEAAEDPTVPPEERTRGQAMAAAIPMRVLSRLWQMLLKAIEEVGAAPNTMM
AAEMAIIRLTHVADLPDPETLMRKIQSGPGEAGGRGPAAGGGGAGGPTMAAGPLAATTMR
ARFGAPIARAGNAALAQAVQAETALARFARFEDVCELIRRMRDVKLLLDVENCLRLVRYA
PGRIEFEPTEDAPRDLAATLSQRLMGWTGARWGVSIVSEGGGETIAETRNAGRRAAEAEA
RAQSAVVQAIFAAFPKARFEAITTAAELAQEHQAEALPEVEDEWDPFEDN
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atgtccgacacgcccgcgaccggctatcaggttctggcccgcaaataccgccccgcgacc
ttcgccgacctgatcggccaggaagcgatggtgcgcacgctgaagaacgccttcgccgcc
tcgcgcatcgcccaggccttcatcatgaccggcatccgcggcaccggcaaaaccaccacc
gcgcggatcatcgccaagggcctcaactgtgtcggcgccgatggccagggcggcccgacg
accgagccctgcctcgtctgcgagcattgccgcgcgatcgccgagggccgccatgtcgat
gtgatggagatggacgcggcctcgcgcaccggggtcggcgatatccgcgagatcatcgag
agcgtgcattaccgggcggcctcggcccgctacaaggtctatatcatcgacgaagtgcac
atgctctcgacgagcgccttcaacgcgctcctgaagaccctcgaagagccgcccgcgcat
gtgaaattcatcttcgccacgaccgagatccgcaaggtgccggtcacggttctgtcacgc
tgccagcggtttgacctcaagcggatcgagcccgaggtgatgatggcgcatctggcgcgc
atcgcaggcctcgagagcgcgcatctcgcgcccgatgcgctggcgctgatcacccgcgcg
gcggagggctcggtgcgcgacgcgatgagcttgctcgaccaggcgatcgcgcatggcgcg
ggggagacgacggccgagcaggtgcgggcgatgctggggctcgccgatcgcgcccgggtg
ctcgatctcttcgacatgatcctgaagggcgatgccgccggcgcgctgactgagcttggc
agccagtattccgacggcgccgacccgatggcggtgctgcgcgatctgaccgagatcacc
cattgggtctcggtgatcaagatcacgcccgaggccgccgaggacccgaccgtgcccccc
gaggagcgcacccgcggccaggcgatggcggcggcgatcccgatgcgggtgctctcgcgg
ctctggcagatgctgctcaaggcgatcgaagaggtcggcgccgcgcccaacacgatgatg
gcggccgagatggcgatcatccggctgacccatgtcgccgacctgcccgacccggaaacc
ttgatgcgcaagatccagtccggcccgggcgaggccggcgggcgcggcccggcggcgggc
ggcggcggggcgggcgggccgacgatggccgcgggccccctggccgcgaccacgatgcgc
gcgcgttttggcgcgccgatcgcgcgggcgggcaacgcggctctcgcccaggccgtgcag
gccgagaccgcgctcgcgcgctttgcgcggtttgaggatgtttgtgagctcatccgccgg
atgcgcgatgtgaagctcctcctcgatgtcgagaattgtctgcgcctcgtgcgctatgcc
cccggccggatcgagttcgagccgaccgaggacgcgccgcgcgacctcgccgcgacgctc
tcgcagcggctgatgggctggacgggcgcgcgctggggcgtgtcgatcgtgagcgagggc
ggcggcgagaccatcgccgagacccgcaacgccgggcgccgcgccgccgaggccgaggcg
cgcgcgcaaagcgcggtcgtgcaggcgattttcgcggccttcccgaaggccaggttcgag
gcgatcaccaccgccgccgaactcgcacaggaacaccaggccgaggctttgcccgaggtc
gaggatgaatgggatcctttcgaggacaattaa
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