KEGG   Rhodobacter sp. LPB0142: LPB142_15055
Entry
LPB142_15055      CDS       T04631                                 
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
rhp  Rhodobacter sp. LPB0142
Pathway
rhp03030  DNA replication
rhp03410  Base excision repair
rhp03420  Nucleotide excision repair
rhp03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:rhp00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    LPB142_15055
   03410 Base excision repair
    LPB142_15055
   03420 Nucleotide excision repair
    LPB142_15055
   03440 Homologous recombination
    LPB142_15055
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:rhp03032]
    LPB142_15055
   03400 DNA repair and recombination proteins [BR:rhp03400]
    LPB142_15055
Enzymes [BR:rhp01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     LPB142_15055
DNA replication proteins [BR:rhp03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     LPB142_15055
DNA repair and recombination proteins [BR:rhp03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     LPB142_15055
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     LPB142_15055
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N DNA_pol_A_exo1 5_3_exonuc
Other DBs
NCBI-ProteinID: AOZ70489
UniProt: A0A1D9MFF1
LinkDB
Position
complement(3078597..3081458)
AA seq 953 aa
MAFGKGCHLHLIDGSAFIFRAYHALPPLTRKSDGLPVGAVAGFANMLFKYIEDASGPDAP
THAAVIFDHSSKTFRNEIYPAYKANRPPAPEDLRPQFPLTREATRAFNLPCLETEGFEAD
DIIATLAREAREAGGRVTIISSDKDLMQLVGGGVEMLDAMKNKVIGPDEVVEKFGVGPER
VIDVQALAGDSVDNVPGAPGIGLKTAALLINEYGDLETLLARAEEIKQPKRRQTLIDFAE
QIRVSKRLVTLEDHAPLPVALDSLEIRDPEPEVLMNFLNEMEFRTLTKRVADKFGVAAPT
LPAIAPGGGADAAERWARGAAPAAPAAPVAAPEAPFDTAAYTAISTREELARWLEAARAE
GVLAVDTETTSLDEMRAELVGVSLALAPGRAAYIPLGHRAGGDDLFGSAELAPGQMPMEE
ALALLKPVLEDDSVLKIGQNMKYDLKILARHGIRVAPFDDTMLMSYAMFSGLHGHGMDEL
SERYLDHRPIPIKELIGSGKSQITFDRVPVDKAVAYAAEDADITLRLWRRFRPMLAPARA
TTIYETEERPLVPVLAEMEMAGVRVDTSVLARMSNAFAQKMAGLEAEIAEIAGQPFNVGS
PKQLGEILFDQMGVPGGQKGKTGAYGTGADVLEDITTMEGQPVAARLASAVLDWRAISKL
KSTYTDALQGHLNPETGRVHTSYSIAGANTGRLASTDPNLQNIPVRSEEGRRIREAFVAG
PGMRIVSLDYSQIELRILAHVADLPEMKEAFRQGVDIHAMTASEMFGVPVEGMDPGVRRQ
AKAINFGVIYGISGFGLARNLRIPRAEAQGFIDRYFERFPGIRRYMDDTIAFAKEHGYVE
TLFGRRIHTPEINAKGPGAGFAKRAAINAPIQGAAADVIRRAMVRMPEAIAGLPAKMLLQ
VHDELIFEVEAGATGALIETARRVMEGAADPAVRLSVPLVVDGGEGASWAEAH
NT seq 2862 nt   +upstreamnt  +downstreamnt
atggcgtttggcaaaggctgtcacctgcatctgatcgacggttcggccttcatcttccgc
gcctatcacgcgctgccgccgctgacgcgcaaatccgatggcctgccggtgggcgcggtc
gcgggctttgccaacatgctcttcaaatatatcgaggacgcgtccggccccgatgcgccg
acccatgcggcggtgattttcgaccatagttccaagaccttccgcaacgagatctacccc
gcctacaaggccaaccgcccgcctgcgcccgaggatctgcgcccgcagttcccgctgacc
cgcgaggccacgcgcgccttcaacctgccctgtctcgagaccgaggggttcgaggccgat
gacatcatcgccacgctcgcgcgcgaggcccgcgaggccggcgggcgggtcacgatcatc
tcgtcggacaaggatctgatgcagctcgtcggcggcggcgtcgagatgctcgacgcgatg
aagaacaaggtgatcggccccgatgaggtggtcgagaaattcggcgtcgggcccgagcgg
gtgatcgatgtgcaggcgctggcgggtgattcggtcgataacgtgcccggcgcgccgggg
atcgggctgaagaccgcggcgcttttgatcaacgaatacggcgatctcgagaccctgctt
gcgcgcgccgaggagatcaagcagcccaagcgccgccagaccctgatcgacttcgccgag
cagatccgggtctcgaaacggctcgtcacgctcgaggatcacgcgccgctgccggtggcg
ctcgacagtctcgagatccgcgacccggagcccgaggtgctgatgaacttcctcaatgag
atggagttccgcacgctgacgaagcgggtggcggataaattcggcgtggcggcgccgacc
ttgcccgcgatcgcgccgggcggcggggccgatgccgccgagcgctgggcgcggggggcg
gccccggccgcgcccgccgcgccggtcgctgcgcccgaggcgccgttcgacaccgccgcc
tataccgcgatttcgacgcgcgaggagctcgcccgctggctcgaggcggcgcgggcggag
ggcgtgctcgccgtcgataccgagaccacctcgctcgatgagatgcgcgccgagctggtg
ggggtgtcgcttgcgctcgcgcccggccgcgcggcctatatcccgctgggccatcgcgcg
gggggcgacgatctcttcggctcggccgagctcgcgcccgggcagatgccgatggaggag
gcgctcgcgcttctcaagcccgtgctcgaggacgacagtgtcctcaagatcggccagaac
atgaaatatgatctgaagatcctcgcccgccacggcatccgcgtcgcgcccttcgatgat
acgatgctgatgagctatgcgatgttctcggggctgcatgggcacgggatggacgagctc
tccgagcgctatctcgaccaccggccgatcccgatcaaggagctgatcggctcgggcaag
agccagatcaccttcgaccgcgtgccggtggataaggccgtcgcctatgccgcggaggat
gccgatatcacgctgcggctgtggcgccggttccgcccgatgctcgcacccgcgcgcgcc
acgacgatctatgagaccgaggagcggccgctcgtgccggtgctcgccgagatggagatg
gcgggggtgcgcgtcgatacctcggtgctcgcgcggatgtcgaacgctttcgcgcagaag
atggccgggctcgaggccgagatcgccgagatcgcgggccagcccttcaacgtgggctcg
cccaagcagctcggcgagatcctgttcgaccagatgggcgtgcccggcgggcagaagggc
aagaccggcgcctatggcaccggcgccgatgtgctcgaggatatcaccacgatggagggc
cagccggtggcggcgcggctcgcctcggcggtgctcgactggcgcgcgatctcgaagctg
aaatcgacctataccgacgcgctgcagggccatctcaaccccgagaccgggcgggtgcac
acctcctattcgatcgccggggcgaacaccgggcgcctcgcctcgaccgacccgaacctg
caaaacatcccggtgcgctccgaggagggccgccgcatccgcgaggcctttgtcgcgggg
ccggggatgcggatcgtctcgctcgattacagccagatcgagttgcgcatcctcgcccat
gtcgccgatctgccggagatgaaagaggccttccgccagggcgtcgacatccacgcgatg
accgcctcggagatgttcggcgtgccggtcgaggggatggacccgggtgtccgccgccag
gccaaggcgatcaatttcggggtgatctacgggatctcgggcttcgggctcgcgcgcaac
ctgcgtatcccgcgcgccgaggcgcagggcttcatcgaccgctatttcgagcgcttcccc
ggcatccggcgctacatggacgacaccatcgccttcgcgaaagaacacggttacgtcgag
accctgttcggccggcgcatccacacccccgagatcaacgccaaaggccccggcgcaggc
tttgccaaacgcgccgcgatcaacgcgccgatccagggcgcggcggcagatgtgatccgc
cgcgcgatggtgcgcatgcccgaggcgatcgcgggcctgcccgccaagatgctcctgcag
gtccatgacgaactgatcttcgaggtcgaggcgggtgccaccggcgcgctgatcgagacc
gcccgccgcgtgatggaaggcgccgccgacccggcggtccgcctctccgtgccgcttgtc
gtcgatggcggcgagggggcgagctgggccgaggcgcattga

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