Rhodobacter sp. LPB0142: LPB142_15055
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Entry
LPB142_15055 CDS
T04631
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
rhp
Rhodobacter sp. LPB0142
Pathway
rhp03030
DNA replication
rhp03410
Base excision repair
rhp03420
Nucleotide excision repair
rhp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rhp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LPB142_15055
03410 Base excision repair
LPB142_15055
03420 Nucleotide excision repair
LPB142_15055
03440 Homologous recombination
LPB142_15055
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rhp03032
]
LPB142_15055
03400 DNA repair and recombination proteins [BR:
rhp03400
]
LPB142_15055
Enzymes [BR:
rhp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LPB142_15055
DNA replication proteins [BR:
rhp03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
LPB142_15055
DNA repair and recombination proteins [BR:
rhp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
LPB142_15055
NER (nucleotide excision repair)
GGR (global genome repair) factors
LPB142_15055
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
Motif
Other DBs
NCBI-ProteinID:
AOZ70489
UniProt:
A0A1D9MFF1
LinkDB
All DBs
Position
complement(3078597..3081458)
Genome browser
AA seq
953 aa
AA seq
DB search
MAFGKGCHLHLIDGSAFIFRAYHALPPLTRKSDGLPVGAVAGFANMLFKYIEDASGPDAP
THAAVIFDHSSKTFRNEIYPAYKANRPPAPEDLRPQFPLTREATRAFNLPCLETEGFEAD
DIIATLAREAREAGGRVTIISSDKDLMQLVGGGVEMLDAMKNKVIGPDEVVEKFGVGPER
VIDVQALAGDSVDNVPGAPGIGLKTAALLINEYGDLETLLARAEEIKQPKRRQTLIDFAE
QIRVSKRLVTLEDHAPLPVALDSLEIRDPEPEVLMNFLNEMEFRTLTKRVADKFGVAAPT
LPAIAPGGGADAAERWARGAAPAAPAAPVAAPEAPFDTAAYTAISTREELARWLEAARAE
GVLAVDTETTSLDEMRAELVGVSLALAPGRAAYIPLGHRAGGDDLFGSAELAPGQMPMEE
ALALLKPVLEDDSVLKIGQNMKYDLKILARHGIRVAPFDDTMLMSYAMFSGLHGHGMDEL
SERYLDHRPIPIKELIGSGKSQITFDRVPVDKAVAYAAEDADITLRLWRRFRPMLAPARA
TTIYETEERPLVPVLAEMEMAGVRVDTSVLARMSNAFAQKMAGLEAEIAEIAGQPFNVGS
PKQLGEILFDQMGVPGGQKGKTGAYGTGADVLEDITTMEGQPVAARLASAVLDWRAISKL
KSTYTDALQGHLNPETGRVHTSYSIAGANTGRLASTDPNLQNIPVRSEEGRRIREAFVAG
PGMRIVSLDYSQIELRILAHVADLPEMKEAFRQGVDIHAMTASEMFGVPVEGMDPGVRRQ
AKAINFGVIYGISGFGLARNLRIPRAEAQGFIDRYFERFPGIRRYMDDTIAFAKEHGYVE
TLFGRRIHTPEINAKGPGAGFAKRAAINAPIQGAAADVIRRAMVRMPEAIAGLPAKMLLQ
VHDELIFEVEAGATGALIETARRVMEGAADPAVRLSVPLVVDGGEGASWAEAH
NT seq
2862 nt
NT seq
+upstream
nt +downstream
nt
atggcgtttggcaaaggctgtcacctgcatctgatcgacggttcggccttcatcttccgc
gcctatcacgcgctgccgccgctgacgcgcaaatccgatggcctgccggtgggcgcggtc
gcgggctttgccaacatgctcttcaaatatatcgaggacgcgtccggccccgatgcgccg
acccatgcggcggtgattttcgaccatagttccaagaccttccgcaacgagatctacccc
gcctacaaggccaaccgcccgcctgcgcccgaggatctgcgcccgcagttcccgctgacc
cgcgaggccacgcgcgccttcaacctgccctgtctcgagaccgaggggttcgaggccgat
gacatcatcgccacgctcgcgcgcgaggcccgcgaggccggcgggcgggtcacgatcatc
tcgtcggacaaggatctgatgcagctcgtcggcggcggcgtcgagatgctcgacgcgatg
aagaacaaggtgatcggccccgatgaggtggtcgagaaattcggcgtcgggcccgagcgg
gtgatcgatgtgcaggcgctggcgggtgattcggtcgataacgtgcccggcgcgccgggg
atcgggctgaagaccgcggcgcttttgatcaacgaatacggcgatctcgagaccctgctt
gcgcgcgccgaggagatcaagcagcccaagcgccgccagaccctgatcgacttcgccgag
cagatccgggtctcgaaacggctcgtcacgctcgaggatcacgcgccgctgccggtggcg
ctcgacagtctcgagatccgcgacccggagcccgaggtgctgatgaacttcctcaatgag
atggagttccgcacgctgacgaagcgggtggcggataaattcggcgtggcggcgccgacc
ttgcccgcgatcgcgccgggcggcggggccgatgccgccgagcgctgggcgcggggggcg
gccccggccgcgcccgccgcgccggtcgctgcgcccgaggcgccgttcgacaccgccgcc
tataccgcgatttcgacgcgcgaggagctcgcccgctggctcgaggcggcgcgggcggag
ggcgtgctcgccgtcgataccgagaccacctcgctcgatgagatgcgcgccgagctggtg
ggggtgtcgcttgcgctcgcgcccggccgcgcggcctatatcccgctgggccatcgcgcg
gggggcgacgatctcttcggctcggccgagctcgcgcccgggcagatgccgatggaggag
gcgctcgcgcttctcaagcccgtgctcgaggacgacagtgtcctcaagatcggccagaac
atgaaatatgatctgaagatcctcgcccgccacggcatccgcgtcgcgcccttcgatgat
acgatgctgatgagctatgcgatgttctcggggctgcatgggcacgggatggacgagctc
tccgagcgctatctcgaccaccggccgatcccgatcaaggagctgatcggctcgggcaag
agccagatcaccttcgaccgcgtgccggtggataaggccgtcgcctatgccgcggaggat
gccgatatcacgctgcggctgtggcgccggttccgcccgatgctcgcacccgcgcgcgcc
acgacgatctatgagaccgaggagcggccgctcgtgccggtgctcgccgagatggagatg
gcgggggtgcgcgtcgatacctcggtgctcgcgcggatgtcgaacgctttcgcgcagaag
atggccgggctcgaggccgagatcgccgagatcgcgggccagcccttcaacgtgggctcg
cccaagcagctcggcgagatcctgttcgaccagatgggcgtgcccggcgggcagaagggc
aagaccggcgcctatggcaccggcgccgatgtgctcgaggatatcaccacgatggagggc
cagccggtggcggcgcggctcgcctcggcggtgctcgactggcgcgcgatctcgaagctg
aaatcgacctataccgacgcgctgcagggccatctcaaccccgagaccgggcgggtgcac
acctcctattcgatcgccggggcgaacaccgggcgcctcgcctcgaccgacccgaacctg
caaaacatcccggtgcgctccgaggagggccgccgcatccgcgaggcctttgtcgcgggg
ccggggatgcggatcgtctcgctcgattacagccagatcgagttgcgcatcctcgcccat
gtcgccgatctgccggagatgaaagaggccttccgccagggcgtcgacatccacgcgatg
accgcctcggagatgttcggcgtgccggtcgaggggatggacccgggtgtccgccgccag
gccaaggcgatcaatttcggggtgatctacgggatctcgggcttcgggctcgcgcgcaac
ctgcgtatcccgcgcgccgaggcgcagggcttcatcgaccgctatttcgagcgcttcccc
ggcatccggcgctacatggacgacaccatcgccttcgcgaaagaacacggttacgtcgag
accctgttcggccggcgcatccacacccccgagatcaacgccaaaggccccggcgcaggc
tttgccaaacgcgccgcgatcaacgcgccgatccagggcgcggcggcagatgtgatccgc
cgcgcgatggtgcgcatgcccgaggcgatcgcgggcctgcccgccaagatgctcctgcag
gtccatgacgaactgatcttcgaggtcgaggcgggtgccaccggcgcgctgatcgagacc
gcccgccgcgtgatggaaggcgccgccgacccggcggtccgcctctccgtgccgcttgtc
gtcgatggcggcgagggggcgagctgggccgaggcgcattga
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