Rhodobacter sp. LPB0142: LPB142_15860
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Entry
LPB142_15860 CDS
T04631
Name
(GenBank) IS1380 family transposase
Organism
rhp
Rhodobacter sp. LPB0142
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Gene cluster
GFIT
Motif
Pfam:
DDE_Tnp_1_4
DDE_Tnp_1
Motif
Other DBs
NCBI-ProteinID:
AOZ70625
UniProt:
A0A1D9MFG8
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Position
complement(3270937..3272292)
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AA seq
451 aa
AA seq
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MDHLEGAGLARGDRVDFDRRVRLEFRGAQISSDGGLLVMRELDDVLGLSNLASEALRDSR
TGKNTLHRLDGLFRQSVFGRLAGYEDVNDADRLALDPVMRQVVGGRAVEAQAASASQMGR
FETETLALAANRAALADLNGQWIDRFHDRNGLKYIVLDMDSSVSPTHGDQEGAAWNGHFD
CTCYHPIFLFNQFGMLERCALRNGNVHSADGWRDVLDPVIARYAGRDLGGRFFRADAAYA
IPAIYMRLEEARFFYAIRLPANAVLREKIAHRLTRPVGRPSLTKVKRFFEDFEYQAASWD
KPRRVIAKIEWHPGELFPKVGFIVTNLPMEPDWVVRFYNQRGTAEQHIKEGKYAFRWTRL
SCRKFRHNEVRLQLHALAYNLATFLRCIELPEAMADWSLTSLQLKLIKIGARVVRHARAI
TFQLAEVAVTGPMVRAVLAAIRRLRTPPSCA
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atggatcacctggagggtgcgggcttggcgcggggagatcgggttgatttcgaccgccgt
gtgcgtctggagttccgtggtgcgcagatcagttcagacggtggcctgctggtgatgcgc
gagcttgatgacgtgctcggcctgtccaatctggcgtcggaggcgctgcgagacagccgc
accgggaagaacacgctccatcggcttgacggattgttccggcaatcggtgttcggacga
ctggccggatacgaggatgtgaacgatgccgaccgcttggccctcgatcccgtgatgcgt
caggtcgttggcggcagggccgtcgaggcgcaagctgcttcggcatcgcagatgggacgg
ttcgagaccgagacgctggctctggccgcgaaccgggcggcgctggccgatctgaacggc
caatggatcgaccggtttcatgaccgcaacgggttgaaatacatcgtgctggacatggac
agctcggtcagccccacccacggcgatcaggaaggtgctgcctggaacgggcatttcgac
tgcacctgctatcaccccatcttcttgttcaaccagtttggcatgctggagcgctgcgcc
ctgcgtaacggcaatgtccacagcgccgatggctggcgggatgtccttgatcccgtcatt
gcccgatatgctggccgcgaccttggtggacgcttcttccgggccgacgctgcctacgcg
atccccgcgatctatatgcggctggaagaagccaggttcttctacgccatccgtctgccc
gccaacgccgtcttgcgcgagaagatcgcgcatcggctgacacggcccgtgggacggcct
tcgctgaccaaggtcaaacggttcttcgaggacttcgagtatcaggcggcgtcctgggac
aagccgcgccgcgtcatcgccaagatcgaatggcatccgggcgagctgttccccaaagtc
ggcttcatcgtcaccaacctgccgatggagccagactgggtggtgaggttctacaaccag
cgcggcaccgcagagcagcacatcaaggaaggcaaatatgcctttcgctggacgcggctg
tcatgccggaagttccggcacaacgaggtgcggctgcaactgcacgcgctggcctacaac
ctggcaaccttcctgcgctgcatcgaactgcccgaggccatggcggactggtcgttgacc
agcctgcaactcaagctgatcaagatcggcgcccgcgtcgtccgccacgcccgcgccatt
accttccagttggccgaggtcgccgtcaccggcccgatggtgcgggccgtccttgccgcc
atccgccgtcttcgaacgcctccgtcatgcgcatga
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