Rhodobacter xanthinilyticus: LPB142_17300
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Entry
LPB142_17300 CDS
T04631
Name
(GenBank) methylase
KO
K26273
protein strawberry notch
Organism
rhp
Rhodobacter xanthinilyticus
Brite
KEGG Orthology (KO) [BR:
rhp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rhp03036
]
LPB142_17300
Chromosome and associated proteins [BR:
rhp03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
LPB142_17300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_34
Helicase_C_4
ResIII
MTS
Motif
Other DBs
NCBI-ProteinID:
AOZ71227
UniProt:
A0A1D9MH98
LinkDB
All DBs
Position
pEJ01:93202..97590
Genome browser
AA seq
1462 aa
AA seq
DB search
MTHLAPVAQASLPAPVVPLAANPAPAIVAVAEALQPDLAQGLLIDPLRLRREMEHAFGGS
DATGAWDWKLAYEAGEVALILFLRKFGRALLARAGSPAALLPILAKVAGLLPTHTRRSEE
MERFQQFSTPLPMGLAAVAAAQITPYDLVLEPSAGTGLLAILAEIAGGTLALNELADTRA
DLLRLLFPGRPVTGFDAAQIDDHLDACSSPSVILMNPPFSAVANVDGRSTEATARHLRSA
LARLVPGGRLVAITGAGFAPDAPAWAETFGRLTETAHLIFTGAVSGAAFAKHGTSFETRI
SVFDKCRGGEPGGITADLHQPTSPDVARLMSRVTAEVPPRLEMERAANARLGHSPLFPGN
PAPTTCKPVNRSRATSAAQPEKPGAQIEVEDLSYELRDNAEDATRLSDAIYETFRLQAID
IPAATAHPTKLVQSAAMASVAPPKPTYRPKLPPAVLRDGLLSDAQLETVIYAGEAHGAHL
TGSWTVDETGDMVSAARDDAADAVRFRRGFFLGDGTGAGKGRQSAGILLDNWARGRRKAL
WISKSDKLLEDAQRDWSALGQERLLVTPLSRFAQGRDIPLTEGILFTTYATLRSEERGAK
KSRVDQIVDWLGAEFDGVILFDESHAMANAAGGKGERGDTMASQQGRAGLRLQHKLPNAR
VVYVSATGATTVHNLAYAQRLGLWGGEDFPFQTRSEFVEAIEAGGVAAMEVLARDLRALG
LYTARSLSYDDVEYEMLEHALSPEQRGIYDAYAGAFAIIHNNLTAALEAANISGAADGPT
GSGTLNRQAKSAARSAFESAKQRFFGHLLTSMKTPTLIASIDADLAAGHAAVIQIVSTGE
ALMERRLSEIPTDEWNDIRCDITPREYVLDYLAHSFPVQLYEPFTDSEGNLSSRPVTRDG
QPVECREAVRRRDALIEKLASLPPVPGALDQIVQRFGTDLVAEVTGRSRRIVRKGEGHSA
RLVVENRAGAANFAETQAFMDNEKRILIFSDAGGTGRSYHADLGAKNQRLRVHYLLEPGW
KADAAIQGLGRTNRTNQAQPPLFRPVATDVKAEKRFLSTIARRLDTLGAITRGQRQTGGQ
GLFRPEDNLESPYARDALRQLYRRIYRGDVVGCSLGAFEDATGLSLTDDNGLKDDLPPIT
TFLNRLLALTIDMQAVLFSVFEELLDQRIEGAIAAGVYDLGLETLRAESFRVTDARVIYT
HPGSGAETQLLTIAEKRRNTPTALVDALDWLDDPKARLLVNSRSGRAAVQVPATSLMLDD
GTIEPRLRLIRPFDASTVPAKVMEDTHWLEADRAAFTAAWTAELAQVPEFSDSTLHIVAG
LLLPIWKQLPQDETRVYRLQIDDGQRIIGRRVSPAWVATTLAKDAPKLSAAQVHALVLEG
KTVVRLAEGMELHRSRVMGVNRIELSGFSEAAKDRLKADGFFSEIISWKLRLFCPTDADG
VAILDRLLARCPVASLHDRGGC
NT seq
4389 nt
NT seq
+upstream
nt +downstream
nt
atgacccatcttgcccctgttgcgcaggcgtccttgcctgcgcccgttgttccgttggca
gcaaatcctgcccctgcgatcgttgctgttgccgaagcgctgcagcccgatctggcgcaa
gggcttctgatcgacccgctgcgcctgcgccgcgagatggaacatgcctttggcggttcc
gatgcgaccggtgcttgggactggaagctcgcctatgaggcgggcgaggtggcgctgatc
ctctttctgcggaaattcggtcgggcgttgcttgcgcgtgccggctcgcctgcggcgctc
ttgccgatcctcgccaaggtggcaggcctcttgcccacgcacacccggcggtcggaagag
atggagcgctttcagcaattctcgacgccgctgcccatggggctcgcggctgtggcggca
gcacagatcacgccctatgatcttgtcctagagccgtctgccgggaccgggcttctggcg
atcctcgccgagatcgccggcggcactctggctctgaacgagttggcggacacccgcgcc
gaccttcttcgcttgctgttcccgggccgaccggtcacggggtttgatgccgcgcagatc
gacgatcatctcgatgcctgctcaagcccgagcgtcattctgatgaacccgcccttctcg
gctgtggccaatgtcgatggtcggtcgaccgaggcgacggcccgacatctgcgctcggcc
cttgcgcgcttagttcccggcggacggctcgtggccatcacaggggccggtttcgctcct
gatgcgccggcctgggccgagaccttcggccgtctgaccgagacggcccatctcatcttc
accggcgcggtgtcgggcgcagctttcgccaagcacggcaccagcttcgagacgcggatt
tctgtcttcgataaatgccgcggcggtgagccgggcggcatcaccgctgacctgcaccag
cccacgtcccccgacgtggcgcgtctaatgtccagggtcactgcagaggttccgccgcgc
ctcgagatggaacgggccgcaaatgcgcgtctgggccactctcccctcttcccgggaaat
cctgcccccacaacatgcaagcccgtcaaccgatcgcgcgcgacctctgcggctcaaccg
gagaaacctggagcgcagatcgaggtcgaggacctaagctacgaactccgcgacaacgcc
gaggacgcgacacgtctgtccgatgcgatctacgagaccttccgtttgcaggcgatcgac
atccccgcagcgaccgcacacccgaccaagcttgtgcaatcggcggccatggcctctgtc
gcacctccgaaacccacgtaccgccccaagctgcccccggccgtcctgcgcgacggcctg
ctgtccgacgcgcagctcgagaccgtcatctacgcgggggaggcgcatggcgcgcatctc
actgggtcttggaccgttgatgagaccggagacatggtctccgctgcacgggacgatgcc
gctgacgccgtccgcttccgccggggtttctttttgggtgatggcaccggcgcgggcaag
ggccgtcagtcggccgggatcttgctcgacaactgggcccgaggaagacgcaaggcgctc
tggatctcgaaaagcgacaagcttctcgaggacgcacagcgcgactggtcggcccttggc
caggagcgcctgctggtcacgccgctctcgcgctttgcccaaggccgcgacatcccgctg
accgagggcattctcttcaccacctacgccacactgcgttctgaagaacggggggccaag
aaatcccgcgtcgatcagatcgtcgactggctcggggcggagttcgatggggtgatcctc
tttgacgaaagccatgccatggcgaatgccgccgggggcaaaggcgagcgaggcgatacc
atggcctcgcagcagggcagggcgggtctgcggctgcagcacaaacttccgaatgcccgc
gtggtctatgtctcggccacgggtgccacgaccgtccacaacctcgcctatgcgcagcgt
ctcgggctttggggcggggaggatttccccttccagacccggtcggaattcgtggaagcc
attgaggctggcggtgtcgcggcgatggaggttcttgcccgcgacctccgggcactcggc
ctctacacagcgcggtcgctttcctatgacgatgtcgaatacgagatgctagagcatgct
ctcagccccgagcagcgcggcatctacgatgcctatgccggggccttcgctatcatccac
aacaacctgactgcggcgctggaggcggcgaacatttccggcgcggccgacgggccgacc
gggtcgggcacgctgaaccgccaggccaagtccgcagcgcggtccgccttcgagagcgcc
aaacagcgcttcttcggccatttgctcacctcgatgaagacccccacgcttatcgcatcc
atcgatgcagatctggctgcgggtcacgcggcggtcatccagatcgtctcgacgggtgag
gcgctgatggaacgccgcctgtcggagatcccgaccgacgaatggaatgatatccgttgt
gacatcacacccagggaatacgttctggactacctcgcccattccttcccggtgcagctc
tacgagcctttcaccgacagcgagggcaacctctcgtcgcgccccgtcacgcgcgacggc
caaccggtggagtgccgcgaagccgtccggcgtcgtgacgcgctgatcgagaaactggct
tcgcttccgccggtgccgggtgcactcgaccagatcgtccagcgcttcggcacggatctc
gtggccgaagtcacagggcgctcgcggcgcatcgtgcggaagggcgaagggcattcggca
cggctcgtagtggagaaccgggctggagccgcgaacttcgcggaaacccaagccttcatg
gataacgaaaagcgtatcctgatcttctcggatgccggcggcaccgggcgcagctatcac
gccgatctcggggcgaagaaccagcgcctgcgggtccactacctcttggaacccggctgg
aaagcagacgcggcgattcaaggtttgggccgcaccaaccgcaccaaccaggcgcagccg
ccgctgttccggccggtggccaccgatgtgaaggcggagaagcggttcctgtccaccatc
gcgcgccgcctcgatacgctcggagccatcacgcggggtcagcgccagacgggcgggcag
gggctgtttcgccccgaggacaatctcgagtcaccttacgcccgcgatgcgctgcgccag
ctttaccgccgcatctatcgcggcgatgtcgtgggctgttccctcggggccttcgaggat
gccaccggcctgagcctgaccgatgacaacggtctgaaggacgacctgccgccgatcacg
accttcctcaatcgcctgctggcgctgacgatcgacatgcaagccgtgctattctcggtc
ttcgaggaattgctcgaccagcggatcgagggcgccatcgccgccggggtctatgacctt
gggctcgagacgctgcgcgccgagagcttccgcgtcacggacgcgcgggtgatctacacc
catccaggctcgggtgcggaaacccagcttctcaccatcgcggaaaagcgccgcaacacg
ccgacagcgctcgtggatgcgctcgactggctcgatgatccaaaggcgcggctcttggtc
aacagccgctcaggccgggcggcggtgcaggtgcccgccaccagcctgatgctggacgat
ggcaccatcgagccgcgcctgcgcctgatccgcccgtttgatgccagcacggtcccggcc
aaggtcatggaggacacccactggctcgaggccgaccgcgcggccttcacagcggcgtgg
actgcggaactggcccaggtgccggagttttcggactccacgctgcacatcgtggcaggt
ctgctgctgccgatctggaagcagcttccccaggatgaaacccgcgtctaccgcctgcag
atcgatgacgggcagcgtatcatcggccgccgcgtctcgcccgcctgggtcgcgaccacg
ctggccaaagacgcgccgaagctctcggcggcgcaggtccatgccctcgttctggagggc
aagacagtcgtgaggctggccgaagggatggaattgcaccgctcgcgcgtcatgggtgtg
aaccggatcgagctttcgggcttctcggaggcagccaaggatcgactcaaggccgacggc
ttcttctcggaaatcatcagctggaagctgcggctgttctgcccgaccgacgccgatggc
gtcgcgatactggatcgccttcttgcacgttgccctgtcgcaagtctacatgatcgcgga
ggttgttga
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