KEGG   Rhodobacter xanthinilyticus: LPB142_17875
Entry
LPB142_17875      CDS       T04631                                 
Name
(GenBank) restriction endonuclease subunit R
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
rhp  Rhodobacter xanthinilyticus
Brite
KEGG Orthology (KO) [BR:rhp00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:rhp02048]
    LPB142_17875
Enzymes [BR:rhp01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     LPB142_17875
Prokaryotic defense system [BR:rhp02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   LPB142_17875
SSDB
Motif
Pfam: SWI2_SNF2 HSDR_N T1R_D3-like ResIII T1RH-like_C DEAD
Other DBs
NCBI-ProteinID: AOZ71320
UniProt: A0A1D9MHS6
LinkDB
Position
pEJ01:complement(213951..217166)
AA seq 1071 aa
MTFDAAEKVQSQLPALQLLVALGFTPLSQEEALRLRGGRLRNVVLDDVLAEQLMRINRFT
YRGREYGFDLEDAHEAMRRLKPTPDRLKGLRGTNQDIYDSLVLGTTITKAIDGDSKSYSF
RYIDWERPDNNVFHVTAEFSVERTASSQTRRCDIVAFLNGIPVLVIENKRPTESLKKADS
QLIGYQNEDNIPQLFHFAQLLIGMNRNEARYATVGTLRKFWQTWRDEEDTDEAIAPYANR
VLTAAEKDAIFSGDFAGAHAYFDALAAEGDRAVTVQDRTVYALCRPERLLDFIRRFTVFD
GGVRKVARHQQFFGIRRAVETVKQRDVSGARKGGVIWHTQGSGKSLTMVMLGRALALERS
IENPRILIVTDRDDLDKQIKDTFKSCDLEPIRATSGSHLLDLVRNRAPLVTTIINKFDTA
LKNSKQADDDSSIFVLVDESHRTQTGRYGGHSQFAAKMRRLLPRACYLGFTGTPLLKKEK
NTLSTFGRLIHRYAIDEAVADEAVVPLLYEGRLVEQQVSGNVIDRWFEKISEGLTESQKR
DLKRKFSRMDALSKTDQAIRAKAFDISEHFRQHWQGTGFKAQLVAPSKAAAVRFKEVLDE
IGHVSSAIIISPPDENEGNEEVDQESKDLVRGFWSKMMARHKTEEEYNRQVIDAFKGSGD
PEILIVVSKLLTGFDAPRNTVLYVCKSLKEHNLLQAIARVNRLYEDGGTEKQFGFIVDYE
GLLGELDSALTTYSAFDGYEAADLAGTVHDVREEIRKLPQLHDQLWDIFKPVRNKKDMEQ
FEQHLSDEAIRHEFYARLKAFSRCLHISLSSDKLFDVFDEAKVDALKRDWKQFSELKRSV
QLRYQETVDVREFEPKIQKLLDDHVVAMPAETIIELVNINDPGALKAVVEETGVSEASRA
DRIASATRRAITEKMDEDPTFYKRFSELLEETIRAYREKRLSEREYLKSVVDLASKVARK
DRGRDVPESIRGDEDAQAFFGVLCGQLKTSDNEPLADDEAAEIAKAIIDIVKSHLIVGIW
SNEVAQNNLRNAIDDYFFDVLRDERGVDLSVEVLDDLELKIMGLARARFAV
NT seq 3216 nt   +upstreamnt  +downstreamnt
gtgaccttcgacgccgccgaaaaggtccaatctcagctgcccgcgctgcaattgcttgtg
gcgctcgggttcaccccgctctcgcaggaggaggcgctgcgtctgcgcggcgggcggctg
cggaacgtggtgctggacgatgtgcttgcagagcagctgatgcgcatcaaccgcttcacc
tatcgtggccgcgaatatggtttcgacctcgaggacgcgcatgaggcaatgcggcggctg
aagcccacgccggaccgtttgaagggcctgcgcggcaccaatcaggacatctatgactcg
ctcgtcctcggcacgacgatcacgaaggccatcgacggagactcgaagagctactcgttc
cgctacatcgattgggagcggccggataacaatgtcttccacgtcactgccgagttctcg
gtcgagcgaaccgcgtcgagccagaccaggcgctgcgacatagtcgccttcctgaacggc
atccccgttcttgtgatcgagaacaagcggccgaccgagagcctgaagaaggcggacagc
cagctgatcggctaccagaacgaggacaacatcccgcagctctttcatttcgcgcagctg
ctgatcggcatgaaccgcaacgaggcgcgctacgcgaccgtcggaacgctgcggaagttc
tggcagacttggcgcgacgaggaggacactgacgaggccatcgcgccatatgccaaccgc
gtgctcaccgcggcggagaaggacgccatcttctccggtgatttcgcgggcgcgcacgcc
tatttcgatgccttggccgccgagggcgaccgagcggtcacggtccaggatcggacggtg
tacgcactctgccgtcccgagcggctgctcgatttcatccgccgcttcaccgtgttcgat
ggcggcgtccgcaaggttgcgcgtcatcagcagttcttcggcatccgccgcgccgtcgag
actgtcaagcagcgcgacgtgagcggagcccgtaagggtggcgtcatctggcacactcag
ggctcaggcaagtcgctgacgatggtgatgctgggccgcgcgttggccctcgagcgcagc
atcgagaatccgcggatcctcatcgtgacagaccgcgatgatctcgacaaacagatcaag
gataccttcaaatcatgcgaccttgagccgatccgggcgacgagcggctctcacctgctg
gatctggttcgcaaccgggcgccgctggtcaccacgatcatcaacaagttcgataccgcg
ctgaagaacagcaagcaggcggacgacgattcgagcattttcgtgctggtggacgagagc
caccggacgcagacggggcggtatggcggccacagccagttcgcggcgaagatgcgccgc
cttttgccccgggcctgctacctcggcttcacgggtacaccgttgctgaagaaggaaaag
aacacgttgtcgacctttgggcggctgatccaccgctacgccatcgatgaggcggttgcc
gacgaggctgttgtgccgctgctttacgaagggcggctggttgagcagcaggtctcgggg
aatgtgatcgatcgctggttcgagaagatcagcgaagggctgaccgagagccagaagcgc
gatctgaagcggaagttttcccggatggatgcgctctcgaagaccgatcaggccatccgc
gccaaggcgttcgacatctccgagcactttcgccagcactggcagggaaccggtttcaag
gcgcagctcgtcgccccttcgaaagcggcggcggttcgcttcaaagaggtcctcgacgag
atcggccacgtttcgagtgcgatcatcatctcgccgcccgatgaaaacgagggcaatgag
gaagttgatcaggagtccaaggacctcgtgcgcggcttctggtcgaagatgatggcgcgt
cacaaaaccgaggaagagtataatcgccaggtcatcgatgcgttcaaagggtcaggcgat
ccggagatcctgattgtggtctccaagctcctcaccggtttcgatgctccccggaacaca
gttctttacgtctgcaagtccctgaaggagcacaatctcctgcaggcaattgcgcgcgtg
aaccggctctacgaggatggcggcactgagaagcaattcggcttcatcgtcgactacgag
gggctgctcggtgaactcgacagcgctcttacgacctacagcgcattcgacgggtacgag
gcggcggacctcgccgggacggtgcatgacgttcgcgaggagatccgcaagctgccccag
ctgcacgaccagctttgggatattttcaagccggttcgaaacaagaaggacatggagcaa
ttcgagcagcacctttctgacgaggcgatacggcacgaattctacgcgcgcctcaaggcc
ttcagccggtgcctgcacatctcgctctcgtccgacaagctgttcgacgtcttcgacgag
gcaaaggtcgatgctctgaagcgggactggaagcagttctcagaactcaagcgctcggtt
cagttgcgctaccaggagacggtcgatgtccgcgagttcgaaccgaagatccagaagctg
ctcgatgaccacgtcgtggcgatgcctgccgagaccatcatcgagttggtcaacatcaac
gatcccggcgcgctgaaggctgtcgtcgaggagacgggtgtatccgaagcgtcgagggca
gatcgcattgccagtgcgacccggcgggcaatcaccgagaagatggatgaggacccgacg
ttctacaaacggttctccgagcttctcgaagagacgatccgcgcctatcgtgagaagcgg
ctgtccgagcgcgagtacttgaaaagcgtcgtggatctcgcgagcaaggtggcgcgcaag
gatcggggccgggacgttccggagagcatccgaggcgacgaggatgcacaggcgttcttc
ggcgttctgtgcggtcagctgaagacttcggacaatgagcctttggctgacgacgaggct
gcagagatcgccaaagcgatcatagacattgtcaaatcacacctgatcgtaggcatctgg
tcgaacgaagtggcccagaacaatctgcgcaacgctatcgatgactatttcttcgacgtc
cttcgtgacgagaggggcgtcgacctgtcggtggaggtgctcgacgatctcgagctgaag
atcatgggacttgcgcgggcccggttcgcggtatga

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