Rhodococcus sp. PAMC28707: E5720_09470
Help
Entry
E5720_09470 CDS
T11377
Name
(GenBank) arabinosyltransferase
KO
K11386
arabinosyltransferase B [EC:2.4.2.-]
Organism
rhpc Rhodococcus sp. PAMC28707
Pathway
rhpc00572
Arabinogalactan biosynthesis - Mycobacterium
Brite
KEGG Orthology (KO) [BR:
rhpc00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00572 Arabinogalactan biosynthesis - Mycobacterium
E5720_09470
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
rhpc01003
]
E5720_09470
Glycosyltransferases [BR:
rhpc01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
E5720_09470
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Arabinose_trans
Arabino_trans_C
Arabino_trans_N
Tmemb_14
Motif
Other DBs
NCBI-ProteinID:
QCB58712
LinkDB
All DBs
Position
2087843..2091154
Genome browser
AA seq
1103 aa
AA seq
DB search
MPDAVTDSSAVPSASPRKGSAVDLRSQVRTTRLVAIITGLLGAFLALLTPFLPVVQTTST
INWPEAGSLQDIEAPLVSQAPIAFTASIPCSAVAQLPPSGGLLLATAPPQGEGAALNSLF
VRVSEASVDVLDRNVVVATAPRADVQGAACSSIEITSNIDSTSAEFAGLSDKQGNPRSGR
LDGDLRPQVVGLFTDLSGAAPAGMSATIDVDSRFSSSPTILKLLAMILAVVCTILAVGAL
GRLDGIDGRGHRRFFPSNWWKFTGIDVTVVGVLIGWHFVGANTSDDGYLLTMARAAEKSG
YMANYFRWFGVPEAPFGWYYDVLALFAKVSTASPWIRLPALIAGILCWMVISREVVPRLG
RAVRKSNVALWTGGLVFLAFWLPYNNGLRPEPIVAVGALLTWCSIERSIATGRLLPAAAA
FLIGAFTLAAAPTGLMCVAALLAGARPMARIVIRRHRQVGTLALVAPLAAAGFLVLVVVF
ADQTFATVIESTRVRTAIGPSEAWYQDFLRYYYLFVQTVDGSVARRFAFLVMLLCLFSTL
FILLRRRRVPGIANGPAWRLIGVVFGTIFFMMFNPTKWTHHFGSYAGIAGSLAALTAVAI
SASALRSRRNRTIFLAGLMFVLALAFSGINGYWYVSSYGVPWFDKTVSLGGHESGTLFLA
LFALALALAAWQYLREGYAPPQPRATSERGRRIKKFAAAPLTVVAGLMVLFEILSLVKGA
VSQYPAYSLARSNIESLTGKSCGLATDVLVESDPNAGVLDPIPAGFDPETGPLGGEDPSK
FTPNGVPTDLSADAVEVKPGQGNTDQQSVGPAFEEGQSSGTGGGIGDRGVNGSTAALPFG
LDPATTPVLGSYQPGIQEPASATSSWYALPERSDTAPLIVISAAGRILSVDDTGALTYGQ
SLLMEYGARQPDGTIDVQGTYLPRDIGPAPSWRNLRIPIADLPESADAVRIVANDPNLTG
DQWFAFTPPRVPQLETLNSLIGSEQPVLLDWAVGLQFPCQRPFDHQYGVAEVPNYRILPD
RPLAVSSTDTWQSGDNGGPLGWAELLAKPVTVPTYLDRDWARDWGSLERYDQYYPQAVPP
TIDTSEVTRSGLWTPGNLRVFDK
NT seq
3312 nt
NT seq
+upstream
nt +downstream
nt
gtgcccgacgccgtgacagattcttccgccgtgccctccgcctcaccgaggaagggctct
gcggtcgatcttcgatcccaggtgcgcaccacgcgcctggttgccatcatcaccggtctg
ctcggcgcgtttctcgcgctcctgaccccgtttcttccggtcgtgcaaaccacgtcgacg
atcaactggcccgaggccggttcgctgcaggacatcgaagcgccgctcgtgtcacaggct
cccatcgccttcaccgctagcatcccgtgcagcgccgtcgcacagctaccgccgtcgggt
ggcctcctgctggcaaccgcaccgccccagggtgaaggggcagcgctcaacagcctcttc
gtgcgcgtcagcgaggcgtccgtggacgtattggaccgcaacgtagtagtcgccacagca
ccgcgtgccgacgtccagggcgccgcatgtagctccatcgagatcacctcgaacatcgac
tcgacgtcggccgagttcgccggcctgtccgacaagcagggcaacccgcgctccggacgt
ctcgacggcgacctacgtccccaggtcgtcggactcttcaccgacctctccggtgctgcc
cctgcaggaatgtcggcgactatcgacgtcgattcgcggttctcctcgagcccgacgatt
ctaaaactgctcgcgatgatcctggcggtcgtctgcaccatcctcgccgtgggcgcgctc
ggccgactcgacggcatcgacggccgcggtcaccgacgcttcttcccgtcgaactggtgg
aagttcaccggcatcgacgtcacggtcgtcggcgtcttgatcggctggcatttcgtcgga
gcaaatacttccgacgacggctacctgctgaccatggcccgtgcggccgagaagtccggc
tacatggccaactacttccggtggttcggcgtccccgaagcaccgttcggctggtactac
gacgtcctcgcactgttcgccaaggtgtccacggccagcccatggatccgcctacccgca
ttgatcgccggaatcctgtgttggatggtcatcagccgcgaggtcgttccccgcctgggt
cgcgcagtacgcaaatcgaacgtcgcactgtggaccggtggtctggtgttcctcgcgttc
tggttgccgtacaacaacggactacgcccggagccgatcgtcgccgtcggtgcgctgctc
acctggtgctcgatcgaacgctccatcgcaaccggacgactgttacccgcggccgccgct
ttcttgatcggcgcattcacactcgctgccgcgcctaccggattgatgtgtgtcgcagca
ctgttggcaggcgcacggcccatggctcgaatcgtcattcgacgtcatcgccaagtcggt
acgttggcactcgtcgcgccgctggccgcggcaggattcctcgttctcgtcgtcgtcttc
gccgaccaaaccttcgccaccgtcatcgaatccacccgagtccgcacggccatcggccct
agcgaggcgtggtaccaggacttcctgcgctactactacctgttcgtccagaccgtggac
ggttccgtcgcacgccgattcgcattcctggtgatgctgctgtgcctgttctcgacactg
ttcatcctgttgcgacgtcgacgcgtccccggcattgcgaacggacccgcatggcgtctc
atcggcgtcgtcttcggaaccatcttcttcatgatgttcaacccgaccaagtggacacac
cacttcggttcctacgcaggcatcgccggtagcctcgcggcactgacggccgtcgccatc
tcggccagtgcactccgatcgcgcagaaaccgtacgatcttccttgccggcctgatgttc
gttctggcactggcattttcgggcatcaacggctactggtacgtctcgagctacggcgtc
ccgtggttcgacaagaccgtgtccctcggcggccacgaatccggaacactgttcctcgca
ctgttcgcactcgccttggcgctcgctgcctggcagtacctccgggaggggtacgcgcca
ccgcaaccacgagccaccagcgaacgcggcaggcgcatcaagaaattcgctgcagcaccg
ctcaccgtcgtcgccgggctcatggttctcttcgagatcctctccctcgtcaagggagcc
gtctcgcagtaccccgcatactcactggcccggtccaatatcgaatcactgaccggcaag
agctgcggtttggccaccgacgttctcgtcgaatcggatcccaacgccggcgtcctcgat
ccgatccccgccggtttcgaccccgaaaccggccccctcggcggcgaagacccctcgaaa
ttcactcccaacggcgttcccaccgacctcagcgccgacgccgtggaagtcaaaccagga
cagggcaataccgaccagcagagcgtcgggccggccttcgaagaaggccagagctccggc
accggaggcggaatcggcgaccgtggcgtcaacggatccaccgccgcactccccttcgga
ctcgaccccgccaccacccccgtcctcggctcctaccaacccggaatccaggaacccgcg
tcggcgacctccagctggtacgcactccccgaaagatccgacaccgcaccgttgatcgtc
atctcggccgccggacgcatcctgtccgtcgacgacaccggcgcactgacctacgggcag
tccctcctcatggagtacggcgcgcgccaacccgacggaacgatcgacgtccaaggcacc
tacctgccccgcgacatcggacccgccccatcgtggcgcaacctccgcatccccatcgcg
gacctacccgaaagcgccgatgccgtacgcatcgtggccaacgaccccaacctcaccggc
gaccaatggttcgcgttcaccccgccgcgagtaccgcagctcgaaacgctcaacagcctc
atcggcagcgaacaaccagtcctgctcgactgggccgtcggactccaattcccgtgccag
cgacccttcgaccaccaatacggcgtcgccgaagtaccgaactaccgcatcctccccgac
cgtccactggccgtcagctccaccgacacctggcagtccggggacaacggcggccccctc
ggctgggccgaactcctcgccaagcccgtcaccgttcccacctacctcgaccgagactgg
gcccgcgactggggctccctagaacgctacgaccagtactacccacaggcagtcccaccg
accatcgacacctccgaggtcaccaggtcgggcctctggacccccgggaatctgcgggtg
ttcgacaagtag
DBGET
integrated database retrieval system