KEGG   Rhodococcus sp. PAMC28707: E5720_15260
Entry
E5720_15260       CDS       T11377                                 
Name
(GenBank) DEAD/DEAH box helicase
  KO
K05592  ATP-dependent RNA helicase DeaD [EC:5.6.2.7]
Organism
rhpc  Rhodococcus sp. PAMC28707
Pathway
rhpc03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:rhpc00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    E5720_15260
Enzymes [BR:rhpc01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     E5720_15260
Messenger RNA biogenesis [BR:rhpc03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     E5720_15260
Ribosome biogenesis [BR:rhpc03009]
 Prokaryotic type
  rRNA helicases
   E5720_15260
SSDB
Other DBs
NCBI-ProteinID: QCB61087
LinkDB
Position
3316249..3318036
AA seq 595 aa
MTSDEAISNRSAPAPTDSTPAPDAASEEAPQLTFADLGIEERVLQALRDVGYETPSPIQA
ATIPPLMAGNDVVGLAQTGTGKTAAFAVPILSRLDVSRRVPQALVLAPTRELALQVAEAF
GKYASHIPGLHILPIYGGQAYGIQLSGLRKGAQIIVGTPGRVIDHLEKGTLDLSALEYLV
LDEADEMLKMGFQEDVERILSDTPEYKQVALFSATMPAAIRKISKQYLHDPVEITVKTKT
STAPNITQRYVQVAHQRKLEALTRIFEVEEFEAMIMFVRTKQATEELAEKLRARGFSAAA
INGDIVQAQRERTIGQLKNGQIDILVATDVAARGLDVDRISHVINYDIPHDTESYVHRIG
RTGRAGRAGQALLFVAPRERHLLKAIERATRQPITEMQLPSVDDVNAQRVTKFGDSITES
LESENLALFRRLVEDYVQAHDVPLADIAAALAVQSRDGEAFLLKPEPPAPPRAPREPREP
RPPRSFDADAADSHHRKTGQEMATYRISVGKRHHVAPGAIVGAIANEGGLRRSDFGHISI
RPDHSLVELPADLADETVEALRRTRISGVLIQLTPDSGPPGRSGGGSKFKGKPRR
NT seq 1788 nt   +upstreamnt  +downstreamnt
gtgacgagtgacgaagcaatttcgaataggtcggcaccggcgcccaccgactcgaccccc
gccccggacgctgcgtccgaagaagctccgcagcttactttcgccgacctcggaatcgaa
gaacgtgttctgcaggcactgcgggacgtcggatacgagacaccgtcgcccattcaggcg
gccaccattccgccgctgatggcaggcaacgacgtcgtcggattggcgcaaaccggtacc
ggcaaaactgcggcgttcgcggtgccgatcctctcgcggctcgacgtgtcgcggcgtgtt
ccgcaggcgctggtgttggcaccgacgcgtgagctcgcgctgcaggtggccgaggcgttc
ggtaagtacgcctcgcacatccctggcctgcacatcctgcctatctacggcgggcaggca
tacggtattcagctctcgggtctgcgcaagggtgcgcagatcatcgtgggtacccccggt
cgcgtcatcgatcacctggagaagggcactctcgacctgtccgccctcgagtatctggtc
ctcgacgaggccgacgagatgctcaagatgggcttccaagaggatgtcgagcgaattctc
tcggatactcccgaatacaagcaggtcgctctcttctcggccacgatgcctgctgcgatc
cgcaagatctccaagcagtacttgcacgatcctgtcgagatcaccgtcaagaccaagacc
tcgacggcaccgaacatcacacagcgctacgtgcaggtcgcacatcagcgcaagctggaa
gcactgacacggatcttcgaagtcgaagaattcgaagcgatgatcatgttcgttcgaacc
aaacaggccaccgaggagctcgccgagaagctgcgtgcacggggattctccgcggcagcg
atcaacggtgacatcgtgcaggctcagcgcgagcggaccatcggtcagctcaagaacggc
cagatcgacattctcgttgccaccgacgtcgcggcgcgtggtctcgatgtcgaccgcatt
tcacacgtcatcaactacgacattccgcatgacaccgagtcgtacgtgcaccgcatcggt
cgtaccgggcgcgcgggccgagccggtcaggcgttgctgttcgtagcgccacgggagcgt
cacctgctcaaagcgatcgagcgtgcgacgcgtcagccgatcaccgagatgcagttgccg
agtgtcgacgacgtcaacgcgcaacgcgtcaccaagttcggggactcgatcaccgagagc
ctcgagagcgagaatctcgctctgttccgccggctcgtcgaggattacgtgcaggcgcac
gacgtcccgctcgcggatatcgcagcagcgctcgccgtgcagtcccgcgacggtgaagcg
ttcctgctcaagcccgagccgcccgccccgccgcgcgcaccccgggagccacgcgagccg
aggcctccgcgttcgttcgacgcagacgcggccgattcgcatcaccgcaagaccggtcag
gagatggcgacgtatcggatcagcgtcggcaagcgtcatcacgtcgcgccgggtgccatc
gtcggagctatcgcgaacgagggcggactacgacgcagcgatttcgggcacatcagcatc
agaccggaccactcgctggtggaactgcctgcggacctggccgacgagacggtcgaagcg
ttgcgtcgtactcggatcagtggagtgctgattcagctgacccccgactccgggcctccc
ggacgcagtggcggcggcagcaagttcaagggcaagcccaggcgctga

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