Rhodococcus sp. PD04: U9J23_00065
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Entry
U9J23_00065 CDS
T11027
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
rhpd Rhodococcus sp. PD04
Brite
KEGG Orthology (KO) [BR:
rhpd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rhpd03032
]
U9J23_00065 (gyrA)
03400 DNA repair and recombination proteins [BR:
rhpd03400
]
U9J23_00065 (gyrA)
Enzymes [BR:
rhpd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
U9J23_00065 (gyrA)
DNA replication proteins [BR:
rhpd03032
]
Prokaryotic type
DNA Topoisomerases
U9J23_00065 (gyrA)
DNA repair and recombination proteins [BR:
rhpd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
U9J23_00065 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
WSE22765
LinkDB
All DBs
Position
15836..18340
Genome browser
AA seq
834 aa
AA seq
DB search
MTDTTLPPEGPGHDRIEPVDIQQEMQSSYIDYAMSVIVGRALPDVRDGLKPVHRRVLYAM
FDNGFRPDRGYVKSARAVAETMGNYHPHGDASIYDTLVRLAQPWSMRYPLVDGQGNFGSR
GNDGAAAMRYTECRLTPLAMEMLREIDHETVDFQPNYDGRTQEPTVLPSRIPNLLINGSG
GIAVGMATNIPPHNLGEVAEAIYWALENFEADEETTLAAVMERIKGPDFPTSGLITGSQG
IHDAYTTGRGSVKMRGVVEIEEDAKGRTSIVITELPYMVNPDNLITSIAEQVRDGKIAGI
SDIHDESSDRVGMRIVVTVRRDAVAKVVLNNLYKHTQLQTSFGCNMLSIVDGVPRTLRLD
QMIRLYVNHQIEVIVRRTRYLLRKAEERAHILRGLVKALDALDEVIALIRASQTVDIARA
GLIELLTVDEIQADAILAMQLRRLAALERQKIVDDLAEIEREIEDYKDILARPERQRAIV
RDELKEIVDKYGDERRTRIVAADGDVNDEDLIAREDVVVTITETGYAKRTRTDLYRSQKR
GGKGVKGAELKQDDIVKHFFVTSTHDWLLFFTTKGRVYRAKAYELPEANRTARGQHVANL
LAFQPDERIQGVIRLKTYEDAPYLVLATRNGLVKKSRLSDFDSNRSGGIVAINLRGDDEL
VGAVLCSAEDDLLLVSQQGQSIRFSATDEALRPMGRATSGVQGMRFNGEDKLLSLNVVKE
GTYLLVATSGGYAKRTPMEDYPVQGRGGKGVLTIQYDRKRGNLVGARIVEDDDELYAITS
SGGVIRTAAKQVRKAGRQTKGVRLMNLAEGDTLLAIARNADEPDEADAAGAKES
NT seq
2505 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacaccacgttgcctccggaggggccggggcacgaccgcatcgagcccgtcgac
atccagcaggagatgcagagcagctacatcgattacgcgatgagcgtgatcgtgggccgt
gctctgcccgacgtgcgtgacggtctcaaaccggtgcaccgtcgcgtgctctacgcgatg
ttcgacaacggcttccgccccgaccgcgggtacgtgaagtcggcgcgcgcggtcgccgag
accatgggcaactaccacccgcacggcgacgcgtcgatctacgacacgctcgtgcgtctg
gcacagccgtggtcgatgcgctatccgctcgtcgacggccagggcaacttcggttcccgc
ggcaacgacggcgccgccgccatgcggtacaccgagtgccggctcacgccgctcgcgatg
gagatgctgcgggagatcgaccacgagacggtcgatttccagccgaactacgacggccgc
acgcaggagccgacggttctccccagccgtatccccaacctgttgatcaacggttcgggc
ggtatcgcggtcggtatggccaccaacatcccgccgcacaatctcggcgaggtggcggag
gccatctactgggcgctcgagaacttcgaggccgacgaggagaccaccctcgccgccgtg
atggagcggatcaagggaccggacttcccgacctccggcctgatcaccggatcgcagggc
atccacgatgcctacaccaccggtcgcggatcggtgaagatgcgcggtgtcgtggagatc
gaagaggatgccaagggccgcaccagcatcgtcatcaccgagctgccctacatggtcaac
ccggacaacctcatcacgtcgatcgccgagcaggtccgcgacggcaagatcgcgggcatc
tccgacatccacgacgagtcgtccgaccgcgtcggcatgcgcatcgtcgtcaccgtccgc
cgcgacgcggtggccaaggtggttctcaacaacctctacaagcacacgcagctgcagacg
agtttcggctgcaacatgctgtcgatcgtcgacggggtgccgcgcacgctgcgcctcgac
cagatgatccggttgtacgtcaaccaccagatcgaggtcatcgtccggcgtacgcggtac
ctgctgcgcaaggccgaggaacgcgcccacatcctgcgcggcctggtcaaggccctcgac
gcgctcgacgaggtcatcgcgctcatccgcgcgtcgcagaccgtcgacatcgcgcgtgcc
ggcctgatcgagctgctcacggtcgacgagatccaggccgacgcgatcctggcgatgcag
ctgcgtcgcctcgccgctctcgaacggcagaagatcgtcgacgacctcgccgagatcgag
cgcgagatcgaggactacaaggacatcctggcccgccccgagcggcagcgtgccatcgtc
cgcgacgagctgaaggagatcgtcgacaagtacggcgacgagcgtcgtacgcggatcgtc
gcggccgacggcgacgtcaacgacgaggacctcatcgcacgcgaggacgtcgtcgtcacg
atcaccgagaccggctacgccaagcgcacgcgtaccgacctgtaccgctcgcagaagcgc
ggcggcaagggcgtcaagggtgccgagctcaagcaggacgacatcgtcaagcacttcttc
gtgacgtccacgcacgactggctgctgttcttcaccacgaagggccgcgtctaccgcgcg
aaggcgtacgagctgcccgaggcgaaccgcacggcccgcggtcagcacgtcgcgaacctg
ctggccttccagcccgacgagcgcatccagggcgtcatccgcctcaagacctacgaggat
gcgccgtatctggtgctcgcgacccgcaacggcctggtcaagaagtcgcgcctgtcggac
ttcgactccaaccgttcgggcggcatcgtcgcgatcaacctgcgtggcgacgacgagctc
gtcggcgcggtgctgtgctccgccgaggacgatctgctcctcgtctcgcagcagggccag
tcgatccgcttctcggccaccgacgaggcgctgcgtccgatgggccgcgcgacctccggt
gtgcagggcatgcggttcaacggcgaggacaagctgctctcgctcaacgtcgtcaaggag
ggcacctacctgctggtcgctacctcgggtggttacgccaagcgcaccccgatggaggac
tacccggtccagggccgcggcggtaagggtgttctgaccatccagtacgaccgcaagcgt
ggcaacctggtcggggcgcgcatcgtcgaggacgacgacgagttgtacgccatcacctcg
agcggcggtgtcatccgcactgcggcgaagcaggtgcgcaaggcaggccgtcagaccaag
ggcgtgcggctcatgaacctggccgagggcgatacattgctcgcgatcgcgcgcaacgcc
gacgagccggacgaagccgacgcagccggagctaaggagtcgtaa
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