KEGG   Rhodococcus sp. PD04: U9J23_01085
Entry
U9J23_01085       CDS       T11027                                 
Symbol
pks13
Name
(GenBank) polyketide synthase Pks13
  KO
K12437  polyketide synthase 13
Organism
rhpd  Rhodococcus sp. PD04
Pathway
rhpd00074  Mycolic acid biosynthesis
rhpd01100  Metabolic pathways
rhpd01110  Biosynthesis of secondary metabolites
Module
rhpd_M00887  Mycolic acid biosynthesis, meromycolic acid + alpha-carboxyacyl-CoA + trehalose => TMM => TDM/mAGP/GMM
Brite
KEGG Orthology (KO) [BR:rhpd00001]
 09100 Metabolism
  09103 Lipid metabolism
   00074 Mycolic acid biosynthesis
    U9J23_01085 (pks13)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01004 Lipid biosynthesis proteins [BR:rhpd01004]
    U9J23_01085 (pks13)
Lipid biosynthesis proteins [BR:rhpd01004]
 Polyketide synthase
  Modular PKS
   U9J23_01085 (pks13)
SSDB
Motif
Pfam: ketoacyl-synt Acyl_transf_1 Ketoacyl-synt_C PP-binding Thioesterase KAsynt_C_assoc ACP_SdgA_C Thiolase_N RhiE-like_linker CurL-like_PKS_C Abhydrolase_6 Abhydrolase_3
Other DBs
NCBI-ProteinID: WSE25280
LinkDB
Position
232994..237901
AA seq 1635 aa
MTVAQLREWLRNWIADATGQPVSQISDDRPMEEFGLSSRDAVAMAGEIEELLGVTLNATI
AYQHPTIASLATRIIEGEPEAPAEDDSALYTVGAVAGSKDVAIVGLSTRFPGHVDTPEQM
WDLLASGRDGISDLPEGRWSEFENDPAVWESIRNANTKGGYLDDVKGFDAEFFAMSPREV
EMVDPQQRLALELTWEALEHAHIPPSELKGGSVGVFIGSSASDYMLLAVGDPSAAHPYAL
TGTSTAVIANRVSYFYDFHGPSVTLDTACSSSLVAVHQAVRALRNGEADVALAGGVNMLL
APAGTLGFDELGVMAPDGRIKAFSADADGMIRAEGGGLVVLKRLEDAERDGDNILAVIAG
SAVNQDGRSNGLAAPNPEAQVDVLRRAYRDAQILPSGVDYIEAHGTGTVLGDPIEADALG
RVIGRGREDDKPVLLGSAKTNFGHLESAAGAAGLIKVVLAMQNDQLPPTLNYTAPNPYIP
FDSAHLKVIPEGAKWPRYTGRAVAGVSGFGFGGTNAHVVVHEYTGPEGQEAAEAEVEVLP
EEIPAAAETTEQARELPVLLAVSAAMPSRRRRAAADLADWLETEKGSTTPLADVARTLSR
RNHGRSRAIVVASNHGEAIAGLRAVAAGKPAQGVFNADAPASKGAVWVLSGFGAQHRKMA
KQLYLENPVFAAAVDEVDELIYDESGYSMKEKFLDDAQDYDVETAQVGIFTIQIGLAALL
RHHGAEPAAVVGHSMGEAAGAYISGGLSLEDAVRVICSRSRLMGEAESGLTGDDIRLMAL
VEYSAAEITDVLPDFPQLEVCVYAAPTHTVIGGPQEQVNAIVARAEAEEKFARVLQTKGA
SHTSQVDPILGELAAELAGIEPHRLKVDLYSSVDQETLYRAGHDGIHDVEYWTKGMRHSV
YFTQAIRQALSDGHTTFVELNANPATLMSVAATAFDAGVQDGQFIQTLKRKEDESLGVLA
ALAQLYVHGQSVDLKTLLPEGDYADLPRTAFLRKPYWVDASIGTSGNGRVPGARVALPDG
RYVWEVQASAVTDAAELVVAAASQVLSDVTLTASIPHTDVPATGTLTTTLTRHPGGASLQ
VHANTGDGFTLVHEGVVTSGEPLPAPVAVAAKPAAQAEELPEVAESFGDKWDPNGSQTLD
DRLTLIVAESMGYAPEDLPAEIPLIELGLDSLMAVRIKNRVEYEFDIPQLQLSAVKDASL
RDVAKYLRYAVENREEVAQLAEQQAAEKAAERAAAAEQDDLPEVEDTTAVGEAEQILAEA
EAQTAPGTTEPEQESSGVDVPPRDAAERLTFASWAVVTGKSAKGIFNPLPKLERDVAEKL
AARLTERAEGEITVDDVLAAPTIEQLAETVRQHLESADRIDGLVRTLRPRVEGSDTVPVF
VFHPAGGSTVAYEPLLRRLPAHTPVFGFERTEGPIDTRAQAYLPLIKEIQGDGPYVLCGW
SLGGVLAYAVARLLREEGKDVRLVGLIDTVMAGEKVEDTPDEIRKRWQRYSAFAKKTYGI
DAPLPYDLLAEAGSDEEQIGILMGLLELSGAQIPGGIIEHQRTSWLDNRAIQTAELLPYD
GKVVLYMADKYHDDAIDLEPAFGTRQPDGGWGEVVADLEVVHVGGDHLQIVDEPYISKVG
EDLTRKLADIEASRS
NT seq 4908 nt   +upstreamnt  +downstreamnt
atgacggttgcgcagctgcgcgaatggctgcgcaactggatcgccgacgcgaccgggcag
ccggtctcccagatctcggacgatcgtccgatggaggagttcggactgtcctcccgggac
gccgtcgccatggcgggcgagatcgaggaactcctcggtgtcacgctgaacgcgacgatc
gcctaccagcacccgacgatcgcatcgctcgcgacgcgcatcatcgaaggtgaacccgag
gcacctgccgaggacgactccgccctgtacacggtcggtgccgtggcgggttcgaaggac
gtcgccatcgtcggtctgtccacccgtttcccgggtcacgtcgacactccggaacagatg
tgggatctgctcgcgtccggacgcgacggcatctccgatctgcccgagggccgctggtcg
gagttcgagaacgaccccgccgtgtgggagtcgatccgcaacgccaacaccaagggcggc
tacctcgacgacgtcaagggcttcgacgccgagttcttcgcgatgtcgccgcgcgaggtc
gagatggtcgacccgcagcagcgcctcgcactggagctgacctgggaagcgctcgagcac
gcgcacatcccgccgagcgagctcaagggcggctcggtcggtgtgttcatcggcagctcg
gcgagcgactacatgctcctcgcggtcggcgacccgtccgcagcgcatccgtacgcgctc
accggcacctccaccgcggtcatcgccaaccgcgtgtcgtacttctacgacttccacggc
ccgtcggtcacgctcgacacggcgtgctcgtcgtcgctggtcgccgtgcatcaggccgtg
cgcgcgctgcgcaacggtgaggccgacgtcgccctcgccggtggcgtcaacatgttgctc
gccccggccggcaccctcggcttcgacgaactcggcgtcatggcacccgacggccgcatc
aaggcgttctccgccgacgccgacggcatgatccgcgccgagggcggcggtctcgtcgtg
ctcaagcgtctcgaggacgccgagcgcgacggcgacaacatcctcgcggtcatcgccggt
tcggccgtcaaccaggacggtcgctccaacggtctggccgctcccaaccccgaagcgcag
gtcgacgtgctgcgccgcgcctaccgcgacgcgcagatcctgccgtccggtgtcgactac
atcgaggcgcacggcaccggcacggtactcggcgacccgatcgaggccgatgcgctcggc
cgtgtcatcggtcgtggccgcgaggacgacaagccggtcctgctcggttcggccaagacc
aacttcggtcatctcgagtccgccgccggtgcggccggtctcatcaaggtcgttctcgcg
atgcagaacgatcagcttccgccgacgctcaactacaccgcccccaacccgtacattccg
ttcgacagcgcgcacctgaaggtcatccccgagggtgcgaagtggccgcgctacaccggt
cgcgccgtcgccggcgtgtccggattcggtttcggtggcaccaacgcgcacgtcgtggtc
cacgagtacaccggcccggagggccaggaggccgccgaggccgaggtcgaggtcctgccg
gaggagatccccgccgccgcggagaccaccgagcaggcccgcgagctgcccgtcctgctc
gccgtctccgctgcgatgccgtcacgtcgccgccgtgccgctgccgatctcgccgactgg
ctcgagaccgagaagggcagcacgacgccgctcgccgacgtcgcccgcacgctctcccgt
cgcaaccacggccggtcccgcgcgatcgtcgtggcgagcaaccacggcgaggccatcgcc
ggtctgcgtgccgtcgccgccggcaagcccgcgcagggcgtgttcaacgccgacgctccc
gcctccaagggcgcggtgtgggtgctgtccggcttcggtgcccagcaccgcaagatggcc
aagcagctgtacctggagaacccggtcttcgcggcggccgtcgacgaggtcgacgagctg
atctacgacgagtcgggctactccatgaaggagaagttcctcgacgacgcgcaggactac
gacgtcgagaccgcgcaggtcggaatcttcacgatccagatcggtctcgccgcgctgctg
cgtcaccacggtgccgagcccgccgcggtcgtcggccactcgatgggtgaggccgccggc
gcctacatctcgggcggactgtcgctcgaggacgccgtgcgcgtgatctgctcgcgctcg
cgtctgatgggtgaggccgaatccggcctgaccggcgacgacatccgcctcatggcgctc
gtcgagtacagcgccgccgagatcaccgacgtgctgcccgacttcccgcagctcgaggtc
tgcgtctacgcggcgcccacacacaccgtcatcggtggcccgcaggagcaggtcaacgcg
atcgtggcgcgcgccgaggccgaggagaagttcgcccgggtcctgcagaccaagggcgcg
agccacacctcgcaggtcgatccgatcctcggcgagctcgcggccgaactcgccggcatc
gaaccgcatcgcctgaaggtcgacctgtactcgtcggtcgaccaggagaccctctaccgc
gcaggccacgacggcatccacgacgtcgagtactggaccaagggcatgcgccacagcgtg
tacttcacgcaggcgatccggcaggccctgtccgacggccacaccaccttcgtcgagctc
aacgccaaccccgcgacgctcatgtcggtcgcggcgacggccttcgacgccggtgtgcag
gacggccagttcatccagacgctcaagcgcaaggaggacgagtccctcggcgtgctggcc
gcgctcgcgcagctgtacgtgcacgggcagtccgtcgacctgaagacgttgctgccggaa
ggcgactacgccgacctgccgcgcaccgccttcctccgcaagccgtactgggtcgacgcc
agcatcggcacgtccggcaacggccgcgtgcccggcgcccgggtcgccctgcccgacggc
cgctacgtgtgggaggtgcaggcatccgccgtcaccgatgcggccgagctggtcgtcgcg
gcggcctcgcaggtgctgtccgatgtcacgctcaccgcgtccatcccgcacaccgacgtc
cccgcgaccggcaccctcaccacgacgctcacccggcacccgggtggcgcgtcgctgcag
gtgcacgcgaacaccggcgacggtttcacgctcgtccacgagggtgtcgtcacctccggt
gagccgctgcccgcgcccgtcgcggtggccgcgaagccggccgcgcaggccgaggagctg
cccgaggtcgccgagtcgttcggcgacaaatgggatccgaacggatcgcagaccctcgac
gatcgcctgacgctgatcgtcgccgaatccatgggctacgcgcccgaggacctgccggcc
gagatcccgctcatcgagctgggcctcgactcgctcatggccgtccgaatcaagaaccgc
gtcgagtacgagttcgacattccgcagctgcagctgtcggcggtcaaggacgcgagcctc
cgcgacgtcgcgaagtacctgcggtacgccgtcgagaaccgcgaggaggtcgcgcagctc
gccgagcagcaggccgccgagaaggcagccgaacgcgccgccgctgcggaacaggacgat
ctgcccgaggtcgaggacaccaccgcggtgggcgaggccgagcagatcctcgccgaagcc
gaggcacagaccgcgcccgggacgaccgagcccgaacaggagtcgagcggagtcgacgtg
ccgccgcgcgacgccgcggaacggttgaccttcgcctcctgggccgtggtcacgggcaag
tcggccaagggcatcttcaacccgctgccgaagctcgagcgtgatgtcgccgagaagctc
gcggcacggctgaccgagcgggccgagggcgagatcaccgtcgacgacgtgctcgccgcc
ccgaccatcgagcagctcgccgagacggtccgtcagcatctcgaatccgccgatcgcatc
gacggactcgtgcgcacactgcggccccgcgtcgagggatcggacaccgtgccggtcttc
gtcttccaccctgcgggtggttcgacggtcgcgtacgagccgctgctgcgccgccttccg
gcgcacaccccggtgttcggtttcgagcgcaccgagggcccgatcgacacccgcgcccag
gcgtacctgccgctcatcaaggagatccagggcgacggcccgtacgtgctgtgcggctgg
tcgctcggcggtgtcctggcctacgcggtggcccgtctgctccgcgaggagggcaaggac
gtgcgtctcgtcggcctcatcgacaccgtcatggccggtgagaaggtcgaggacacgccc
gacgagatccgcaagcgctggcagcgttactcggcgttcgcgaagaagacctacgggatc
gacgcgccgctgccctacgacctgctggccgaggccggcagcgacgaggagcagatcggc
atcctgatgggtctgctggagctgagcggggcacagatccccggcggcatcatcgagcac
cagcgcacgtcgtggctcgacaaccgcgccatccagaccgcggaactgctgccctacgac
ggcaaggtcgtgctgtacatggccgacaagtatcacgacgacgcgatcgatctcgagccg
gccttcggtacccggcagcccgacggtgggtggggcgaggtcgtcgcggatctcgaggtc
gtgcacgtcggcggcgatcacctgcagatcgtcgacgagccgtacatctcgaaggtgggg
gaagacctgacccgcaagctggccgacatcgaggcctcgaggagctga

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