Rhodococcus sp. PD04: U9J23_01105
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Entry
U9J23_01105 CDS
T11027
Name
(GenBank) arabinosyltransferase domain-containing protein
KO
K11386
arabinosyltransferase B [EC:2.4.2.-]
Organism
rhpd Rhodococcus sp. PD04
Pathway
rhpd00572
Arabinogalactan biosynthesis - Mycobacterium
Brite
KEGG Orthology (KO) [BR:
rhpd00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00572 Arabinogalactan biosynthesis - Mycobacterium
U9J23_01105
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
rhpd01003
]
U9J23_01105
Glycosyltransferases [BR:
rhpd01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
U9J23_01105
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Arabinose_trans
Arabino_trans_C
Arabino_trans_N
Motif
Other DBs
NCBI-ProteinID:
WSE22954
LinkDB
All DBs
Position
complement(240674..243982)
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AA seq
1102 aa
AA seq
DB search
MPDDVTTSPAPAPTAPRSMGEDLRTRYRTARLVAVVAGLLGMILALATPFLPVRVTEATM
SWPQDSAATDVELPLMSQVPLQFRATVPCSAVAEMPGDGGMLLATAPTNGQDAALNAMFV
RVGAENVDVLDRNVVVATAPRADVESGACSELQIFSDSERTTAEFVGLSDENGNPRAGEL
TGDLRPLVVGVFSDLPSAVPGLDVTVDVDSRFTSSPTLVKSLAMILAVLSTALALGALAK
LDGTDGRGHRRFLPARWWKFTGVDVVVVLTLVGWHFFGANTSDDGYLLTMARVSENSGYM
ANYFRWFGVPEAPFGWYYDVLAAFAKISTASPWMRIPALIAGILCWMVISREVVPRLGRA
VRHNRIALWTGGLVFLAFWLPYNNGLRPEPIVALGALLTWCSIERAIATGRLLPAATAVF
IGAFTLAAAPTGLMCVAALIAGIRPMTRIIVRRHREVGTLPLLAPIGAAGLLVLVVVFSD
QTLAAVLEATRVRTIIGPNEEWWNDFLRYYYLMVQTVDGSLPRRFAFLTMLLCLFTTLFV
LLRRRRIPGVAVSPTWRLLGIVFGTIFFMMFNPTKWTHHFGAYAGIAGSLATVTAVVVSA
SALRSRRNRTIFLAGLLFVLAVSFAGINGWWYVSSYGVPWFDKTVSLSGYQSSSLFLVLF
GLALVLVAWQYLREGYAPPPESPETKKGRRIRALAAAPLTVVAAAMVLFEVLSLLKGAVS
QYPAYSLARSNIGAVAGQTCGLANDVLVEADPNEGRLEPIIDSANPPANDDPLAGASPRG
FTPDGVPSDLTADYVEVKPGQGNTDNQSVGPTFETGAGGGTTGGSGAQTVNGSTVRLPFG
LDPSVTPVLGSYQEGVQEPAALTSSWYALPEITDETPLVIISAAGRIWSYDDTGALTYGQ
SLLVEYGTRQADGSVEAKGTYLPRDIGPAPSWRNLRVPLADLPDDVDAVRIVANDPNLTG
DQWLAFTPPRVPTLERLDAQLGSDQPLLLDWAVGLQFPCQRPFDHWAGVAEMPNYRVLPD
RPLAVSSTDTWQSADNGGPLGFAEVLARPEQVPTYLENDWGRDWGSVERYVRFYPNAQPA
ELTTTEVTRSGLWKPAPMRVYE
NT seq
3309 nt
NT seq
+upstream
nt +downstream
nt
gtgcccgacgacgtgacgacctcacccgcgcctgctccgaccgccccacggtcgatgggc
gaggaccttcgcactcggtaccggaccgcgcgactcgtcgccgtcgtcgccgggttgctc
ggcatgatcctggcgctggccacaccgttcctcccggtccgcgtgaccgaggcgacgatg
tcgtggccgcaggattctgcggcgaccgacgtcgaactgccgttgatgtcgcaagtcccc
ctccagttccgtgccaccgtgccgtgcagcgccgtcgcggagatgccgggcgacggcggg
atgctgctcgcgaccgcccccaccaacgggcaggacgccgcgctcaacgcgatgttcgtg
cgggtcggcgccgagaacgtcgacgtgctcgaccgcaacgtggtggtcgcgaccgcgccg
cgcgccgacgtcgagtcgggtgcgtgcagcgaactgcagatcttctccgactccgaacgc
accaccgccgagttcgtcggcctctcggacgagaacggcaacccgcgggccggtgaactc
accggcgacctgcgaccgctcgtcgtgggcgtgttcagcgacctgcccagcgccgtcccc
ggcctcgacgtcaccgtcgatgtcgactcccggttcacgtcgtcgccgacactggtcaag
tccctcgcgatgatcctggcggtgctgtcgacggcgctcgcgctcggcgcgctggccaag
ctcgacggcacggacggtcgcggtcaccgtcgcttcctgcccgcccgctggtggaagttc
accggcgtcgacgtcgtcgtggtcctcacgctcgtcggctggcacttcttcggcgcgaac
acctcggacgacggctacctgctgaccatggcccgggtgtcggagaactccggctacatg
gccaactacttccgctggttcggcgtccccgaagctcccttcggctggtactacgacgtg
ctggcggcgttcgcgaagatctccacggccagcccgtggatgcgcatccccgctctgatc
gccggaatcctgtgctggatggtcatcagccgcgaggtggtgccgcgcctcggccgggcc
gtgcgacacaaccgcatcgcactgtggacgggcggactggtcttcctcgccttctggctg
ccctacaacaacggtctgcggcccgagccgatcgtcgctctcggtgcgctgctgacctgg
tgctcgatcgagcgtgccatcgcgaccgggcgtctgctgcccgccgcgacggcggtgttc
atcggtgcgttcacgctcgccgcggcaccgaccggcctgatgtgtgtggccgccctcatc
gccggtatccggccgatgacgcggatcatcgtgcgccgccaccgcgaggtgggcaccctg
ccgctgctcgcaccgatcggcgccgccgggttgctcgtgctcgtcgtggtgttctcggat
cagaccctcgccgcggtcctcgaggcgacccgcgtgcgcaccatcatcggccccaacgag
gagtggtggaacgacttcctccgctactactacctgatggtgcagaccgtcgacgggtcg
ctgccgcgccgcttcgcgttcctcacgatgctgctgtgcctgttcacgacgctgttcgtg
ctactgcgccgccgtcgtatccccggcgtcgccgtgagcccgacctggcgtctgctcggc
atcgtcttcggcacgatcttcttcatgatgttcaaccccacgaagtggacccaccacttc
ggggcgtacgcgggcatcgccggttcgctcgcgacggtcacggccgtcgtggtctccgcg
agcgcgttgcggtcgcgccgcaaccgcacgatcttcctcgccggactgctgttcgtcctg
gcagtgtcgttcgccggcatcaacggctggtggtacgtctcgagctacggcgtgccgtgg
ttcgacaagaccgtctcgctgagcggctaccaatccagctcgctgttcctggtcctgttc
ggtctcgcgctcgtgctcgtcgcgtggcagtacctccgcgagggctacgcacctccgccg
gagtcgcccgagacgaagaagggccggcggatccgcgcactcgcggccgcgccgctcacc
gtcgtcgccgcggcgatggtgctgttcgaagtgctgtcgttgctcaagggcgcggtgtcg
cagtacccggcgtactcgctcgcccgctccaacatcggggccgtcgccgggcagacgtgc
ggtctcgcgaacgacgtactcgtcgaggccgaccccaacgagggacgcctcgaaccgatc
atcgattccgccaacccgccggcgaacgacgacccgctcgccggtgcgtccccgcgcggc
ttcactcccgacggcgtgccgtccgacctgaccgccgactacgtcgaggtcaagccgggc
cagggcaacaccgacaatcagagcgtcggtccgaccttcgagaccggcgcgggcggcggc
accacgggtggttccggtgcgcagaccgtcaacggcagcaccgtgcgcctgcccttcggg
ctcgacccgtccgtcaccccggtgctcggcagctaccaggagggtgtgcaggaacccgcc
gcgctcacgtcgagctggtacgccctgcccgagatcaccgacgagacgccgctggtgatc
atctccgcggccggtcgcatctggtcgtacgacgacaccggtgcactgacctacggccag
tcgctgctcgtcgagtacggcacccgccaggccgacggcagcgtcgaggcgaagggcacc
tacctgccgcgcgacatcggccccgcgccgtcgtggcggaacctgcgtgtgccgctcgcc
gacctgcccgacgacgtcgacgccgtccgcatcgtcgccaacgatcccaatctcaccggc
gaccagtggctggcgttcacgccgccgcgtgtgccgaccctcgagcggctcgacgcccag
ctcggctccgatcagccgctcctgctggactgggccgtgggtctgcagttcccgtgccag
cggccgttcgaccactgggccggtgtcgccgagatgccgaactaccgggtcctccccgac
cgtcctctcgcggtgtcgtcgaccgacacctggcagtccgccgacaacggtggtccgctc
ggtttcgcggaggtcctggcgcgccccgagcaggtgcccacctacctggagaacgactgg
ggtcgcgactggggttcggtggagcggtacgtgcgcttctacccgaatgcgcagccggcc
gaactgaccaccaccgaggtgacacggtcgggtctgtggaagcccgcgccgatgcgcgtc
tacgagtga
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