Rhodococcus sp. PD04: U9J23_01345
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Entry
U9J23_01345 CDS
T11027
Name
(GenBank) very short patch repair endonuclease
KO
K07458
DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-]
Organism
rhpd Rhodococcus sp. PD04
Brite
KEGG Orthology (KO) [BR:
rhpd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rhpd03400
]
U9J23_01345
DNA repair and recombination proteins [BR:
rhpd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
U9J23_01345
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Vsr
MTES_1575
DUF559
Motif
Other DBs
NCBI-ProteinID:
WSE22997
LinkDB
All DBs
Position
complement(296062..296556)
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AA seq
164 aa
AA seq
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MASSDRPGTDPRTSARMSRQRRRDTVPEVALRKELHRRGRRFFVDRAPLPGMRRRADLLF
PRRRVAVYVDGCFWHSCPQHATSPKNNAEWWAAKLAANVQRDRDTDARLQAAGWTVVRVW
EHEDPVVAATRVEDALSPPPDTDAGPARGVIPRTGPGTDPINPW
NT seq
495 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgtcggatcggcccgggacggatccgcgtacgagtgcgcggatgagccggcag
cgccgacgcgacaccgttcccgaagtggcgttacgcaaggaactgcatcgccgtggacgg
cggttcttcgtcgaccgcgctcccctgcccggcatgcggcgccgggccgacctcctcttc
ccccgtcgtcgggtcgcggtctacgtggacggctgcttctggcacagctgcccgcagcac
gcgacctccccgaagaacaacgccgagtggtgggcggccaagctcgccgccaacgtgcag
cgcgaccgggacaccgacgcgcgcctgcaggctgcgggctggacggtggtgcgcgtgtgg
gagcacgaggaccccgtcgtcgccgcgacgcgcgtggaggacgctctgtcgcctcctccg
gacacggatgcggggccggcgcggggggtgatcccccgcaccggccccggaaccgatccg
atcaacccttggtga
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