Rhodococcus sp. PD04: U9J23_02070
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Entry
U9J23_02070 CDS
T11027
Name
(GenBank) Crp/Fnr family transcriptional regulator
KO
K10914
CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
Organism
rhpd Rhodococcus sp. PD04
Pathway
rhpd02020
Two-component system
rhpd02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rhpd00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
U9J23_02070
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
U9J23_02070
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rhpd03000
]
U9J23_02070
Transcription factors [BR:
rhpd03000
]
Prokaryotic type
Helix-turn-helix
CRP/FNR family
U9J23_02070
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
cNMP_binding
HTH_Crp_2
HVO_A0261_N
Crp
GntR
Sigma70_r4
Sigma70_r4_2
MarR_2
HTH_24
HTH_23
HTH_29
HTH_3
HTH_ParB
wHTH-PRTase_assc
HTH_Cmi2_C
HTH_IclR
DUF977
DUF134
HTH_28
DUF6907
Motif
Other DBs
NCBI-ProteinID:
WSE23125
LinkDB
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Position
complement(451050..451724)
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AA seq
224 aa
AA seq
DB search
MDEVLARAGIFQGVEPSAVAALIKELQPVDFPRGHVIFNEGEPGDRLYIIVSGKVKLGRR
SPDGRENLLTIMGPSDMFGELSIFDPGPRTSTATTVTEVRAVSMDRDALKAWIDQRPEIA
EQLLRVLARRLRRTNNSLADLIFTDVPGRVAKALLQLAQRFGTQEAGALRVTHDLTQEEI
AQLVGASRETVNKALADFAHRGWLRLEGKSVLISDSERLARRAR
NT seq
675 nt
NT seq
+upstream
nt +downstream
nt
gtggacgaggtcctggccagagcaggcatcttccaaggagtcgagccctcggcggttgcg
gcgctgatcaaagagcttcagcctgtagatttcccgcgcggccatgtcatcttcaacgag
ggtgagcccggcgaccggctgtacatcatcgtttccggcaaggtgaagctcggacgtcgt
tcgcccgacggccgcgagaacctcctgacgatcatgggcccgtccgacatgttcggcgag
ctgtcgatcttcgatccgggtccgcgcacctccaccgccaccaccgtcaccgaggtgcgt
gccgtgagcatggaccgcgatgcgctcaaggcgtggatcgaccagcgccccgagatcgcc
gagcagctcctccgcgtgctggcccgtcgtctgcgtcgcaccaacaacagcctcgccgac
ctgatcttcaccgacgtccccggtcgtgtcgccaaggcgctgctccagctcgcccagcgt
ttcggcacccaggaggccggcgccctgcgtgtcacgcacgacctgacacaggaagagatc
gcgcagctcgtcggcgcgtcccgcgagaccgtgaacaaggccctggccgacttcgcgcac
cgcggctggctgcgtctcgagggcaagagcgtgctgatctccgactcggagcgtctggcg
cgtcgcgctcgctga
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