Rhodococcus sp. PD04: U9J23_06155
Help
Entry
U9J23_06155 CDS
T11027
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
rhpd Rhodococcus sp. PD04
Pathway
rhpd03440
Homologous recombination
Brite
Enzymes [BR:
rhpd01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
U9J23_06155
DNA repair and recombination proteins [BR:
rhpd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
U9J23_06155
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
WSE23879
LinkDB
All DBs
Position
1320696..1324028
Genome browser
AA seq
1110 aa
AA seq
DB search
MPDTAITDPRDAGGPPPAGFDLLGPLPSGTTVLEASAGTGKTYAIVGLATRFVAEGHARL
SDLLLVTFSRAATQELRERTRNRFAQVATALADPDGARASNDMLVRHLASEDVDARRARL
RQALSDFDSGTISTTHGFCRRMLDELGIAGEREPDVTVVEDVDDLRAEVVADLYLRRYGR
GQAPITYAEAAVAAKEAIFDPQAELAPNDADGTAAGERVEFARAVREEVERRKRRLGLRD
FDDQLSLLHAVLGDPEHGDAACRRVRARFSVVLVDEFQDTDPKQWEILRRAFHGHSTLVL
VGDPKQAIYAFRGAEVLSYLDAVSESDTYCELTTNWRSDGDLVRALEHVHLGATLGDPRI
VVNPVKAAAADSRLSGIAPLRVRHLPRAGAGPLNDWGFPQNLDGLRGRVARDVAADIVRL
LDDENVTVDLGSGPERVQPGHIAVLVRKHKQVTLVHDALTKANVPCVVAGGTSVFATPSA
QHWLWVLYALEQPHRADRVRLAALTPLLGRTMTDIDSEGEALVVEVGGLLRELNDVYART
GFAAVFERLASFGSVEARLLDEPSGERTLTDIRHVAQLLEDVASAQSLGLAALTRWLEDR
INDPDRGGADRIRRLDSDAAAVQILTVHGSKGLEFPVVHVPYGWDAAKNPEPDKLLLHEN
GRRILDVGGKSGPGYVARRRQHELEEAGEELRLLYVAVTRAQCALTLWWAPSTPTSRSPL
HRLLFAREPGSPEVAAEGRIGHDEAMAEEFERWAVRAGGVIAAEAVGSHPIPVLRWTRPR
VETGPLAAARFDRVVDENWRRTSYSALTASVHDAPVVSGEVEEPVTIDEPDEPPLSATEP
AWEGIPSPMNGLPGGTVFGTLVHAVLEVVDTSAPDLEAELLDCCRETVRRQMSPIDPAQL
AAALLPVMRTPLGPLGRTLADFAPSDRLSELDFELPLTGGDSPVPVTVTLDAVGGLLRRH
LPADDPMAAYADRVRTLEPVPLRGYLNGSIDAVLRTEGPAFVVVDYKTNRLAPVDELTTA
HYTRESMAAEMLRAHYPMQALLYSVALHRYLRWRMRDYDPHVHLSGVQYLFVRGMAGPDS
PSGSGVFDWHPPAGLVTDLSDLLAGKAVIS
NT seq
3333 nt
NT seq
+upstream
nt +downstream
nt
gtgcccgacaccgctatcaccgatccccgcgacgcgggcggcccgccgccggcaggcttc
gatctgctcggcccgctcccgagcggcaccaccgtactcgaggccagcgcgggaacggga
aagacatatgcgatcgtcgggctcgccacccggttcgtcgccgaaggacacgcccgcctg
tccgacctgctgctcgtcaccttcagccgggccgcgacgcaggaactgcgtgaacgcacc
cggaaccggttcgcgcaggtcgccaccgccctcgccgatcccgacggtgcacgggcgagc
aacgacatgctcgtccgtcatctcgcgagcgaggacgtcgacgcgcggcgggcccggctg
cgacaggcgttgtccgacttcgactccggcaccatctccaccacgcacggtttctgccgc
cgcatgctcgacgaactcggcatcgccggcgaacgcgaacccgacgtcacggtcgtcgag
gacgtcgacgacctgcgagcagaggtcgtcgccgatctctacctgcggcgctacggcagg
ggacaagcccccatcacctacgccgaggcggccgtcgccgcgaaggaggcgatcttcgac
ccgcaggccgaactcgcaccgaacgatgccgacggcaccgcggccggtgaacgggtggag
ttcgcgcgagcggtccgcgaggaggtcgagcgacgcaagcgccggctcggactgcgcgac
ttcgacgaccagttgtccctgctgcacgcggtgctcggcgatccggagcacggcgacgcc
gcctgccggcgggtgcgcgcgcgtttctccgtcgtcctcgtcgacgagttccaggacacc
gaccccaagcagtgggagatcctgcgccgggcattccacgggcacagcacgctcgtgctc
gtcggcgacccgaagcaggccatctacgccttccgcggcgcagaggtgctcagctatctc
gatgccgtctccgaatccgacacctactgcgagctgaccaccaactggcgcagcgacggc
gatctcgtccgggcgctcgaacacgtccatctcggtgccaccctcggtgatccgcgcatc
gtggtgaacccggtgaaggcggcggccgccgattcccggctctcgggtatcgcgcccctg
cgcgtgcgccacctgccccgtgccggtgccggtccgctcaacgactggggtttcccgcag
aatctcgacggcctgcgcgggcgggtcgcccgcgacgtcgcggccgacatcgtgcgcctg
ctcgacgacgagaacgtcaccgtcgacctcggttccggccccgaacgcgtgcaacccggg
cacatcgccgtcctcgtacgcaagcacaagcaggtgacgctcgtccacgacgctctgacg
aaggcgaacgtgccgtgcgtggtcgccgggggcacgagtgtgttcgccacaccgtccgcg
cagcactggctgtgggtgctctacgcgctcgagcagccccatcgcgccgatcgtgtccgg
ctcgccgcgctcactccgctgctgggccgcacgatgaccgacatcgattcggagggcgaa
gcgctggtcgtggaggtcggcggactgctgcgcgaactgaacgacgtctacgcccgtacc
ggattcgccgccgtcttcgagcgactggcgtccttcggttcggtcgaggcccgcctcctc
gacgagccgtccggggaacgcaccctcaccgatatccggcacgtcgcgcagctgctcgag
gacgtcgcctcggcacagtcgctggggctggccgcgctcacccgttggctcgaggatcgc
atcaacgaccccgaccgtggtggggccgaccggatccggcgtctcgacagcgacgccgcg
gcggtccagatcctcaccgtgcacggcagcaagggactcgagttccccgtcgtccacgtt
ccgtacgggtgggatgccgcgaagaaccccgagcccgacaagctgctgctgcacgagaac
ggccgacgcatcctcgacgtgggcggcaagagcggtcccggctacgtcgcgcggcgtcgt
cagcacgaactcgaggaggcgggggaggaactgcgcctgctgtacgtggcggtgacgcgc
gcgcagtgtgcgctcactctctggtgggcgccgtccactcccacctcgcggtcgccgctg
caccggttgctgttcgcccgcgagcccggctcgcccgaggtcgccgcggagggccggatc
ggtcacgacgaggccatggccgaggaattcgagcggtgggctgtgcgcgccggtggggtc
atcgccgccgaagcggtggggtcgcatccgattccggtgctgcgctggacccgcccccga
gtggagaccggccctcttgccgccgcccgtttcgatcgggtcgtcgacgagaactggcgc
aggacctcctattcggcgctcaccgcctcggtgcacgatgcaccggtggtgagcggtgag
gtggaggagccggtgacgatcgacgagccggacgagcctccgctgagcgcaacggaaccc
gcgtgggaaggcatcccgtcaccgatgaacggactgccgggcggcaccgttttcggcacg
ctggtgcacgccgtcctcgaggtcgtcgacacctccgccccagatttggaggccgaactg
ctcgactgctgccgcgagacggtgcgtcgccagatgtcgccgatcgaccccgcgcagctc
gcggcggcgctgctcccggtgatgcgcaccccgctcgggccgctcggccggaccctcgcg
gatttcgctccctccgaccggctctccgaactcgacttcgagttgccgctgaccggcggc
gacagtccggtgcccgtcaccgtcaccctcgacgcggtcggcgggttgctgcgccggcac
ctgcccgccgacgatccgatggcggcctacgccgatcgggtgcgcaccctcgaacccgtg
ccgctgcggggttacctcaacggcagtatcgacgccgtactgcgcaccgaggggccggca
ttcgtcgtcgtcgattacaagaccaaccggctcgcgcccgtcgacgaactgaccaccgcg
cactacacccgcgagtcgatggcagcggagatgctccgcgcccactatccgatgcaggct
ctgctctattccgttgccctgcaccgttatctgcggtggcggatgcgcgactacgacccg
cacgtccatctcagtggtgtgcagtacctgttcgtccgcggcatggccggaccggacagc
ccatccggcagcggcgtgttcgactggcacccgccggccggcctcgtcaccgacctgtcc
gacctcctcgccggaaaggccgtgatctcgtga
DBGET
integrated database retrieval system
