Rhodococcus sp. PD04: U9J23_06430
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Entry
U9J23_06430 CDS
T11027
Name
(GenBank) fumarate hydratase
KO
K01676
fumarate hydratase, class I [EC:
4.2.1.2
]
Organism
rhpd Rhodococcus sp. PD04
Pathway
rhpd00020
Citrate cycle (TCA cycle)
rhpd00620
Pyruvate metabolism
rhpd00720
Other carbon fixation pathways
rhpd01100
Metabolic pathways
rhpd01110
Biosynthesis of secondary metabolites
rhpd01120
Microbial metabolism in diverse environments
rhpd01200
Carbon metabolism
Module
rhpd_M00009
Citrate cycle (TCA cycle, Krebs cycle)
rhpd_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
rhpd_M00982
Methylcitrate cycle
Brite
KEGG Orthology (KO) [BR:
rhpd00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
U9J23_06430
00620 Pyruvate metabolism
U9J23_06430
09102 Energy metabolism
00720 Other carbon fixation pathways
U9J23_06430
Enzymes [BR:
rhpd01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.2 fumarate hydratase
U9J23_06430
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Gene cluster
GFIT
Motif
Pfam:
Fumerase_C
Fumerase
Histone_H2A_C
Motif
Other DBs
NCBI-ProteinID:
WSE23931
LinkDB
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Position
complement(1379017..1380714)
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AA seq
565 aa
AA seq
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MADFLYEDLLPIGEDPTEYRLLTTEGVSTVEGPDGRTFLKVEPEALRLLTETALHDISHY
LRTDHLKQLASILDDPEASNNDKFVALDLLKNANIAAGGVLPMCQDTGTAIVMGKRGQQV
LTPGDDEESIARGVYDAYTKLNLRYSQNAPLTMWDEKNTGNNLPAQIELYADTAKGHENA
YKFLFMAKGGGSANKSYLYQETKAILNPDSMMQFLEAKIRSLGTAACPPYHLAIVVGGTS
AEFALKTAKYASAHYLDELPTEGAMTGRGFRDLELEKKVFELTQKIGIGAQFGGKYFCHD
VRVVRLPRHGASLPVAIAVSCSADRQAKAKITPEGVFLEQLEFNPGQFLPEVTDSQLDAE
TSGVSGTGKGAAVKIDLTRPMPEILAELSKHPVKTRLSLTGPLVVARDIAHAKIKERLDR
GEEMPQYLKDHPVYYAGPAKTPEGLASGSFGPTTAGRMDSYVDQFQAAGGSMVMLAKGNR
SKQVTDACHKYGGFYLGSIGGPAARLALDCIKNVEVVEYEELGMEAVWKIEVEDFPAFIV
VDDKGNDFFAHTGEVTLTVGKRPGL
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atggccgacttcctctacgaggacctgctgccgatcggggaagaccccaccgagtatcgg
ttgctgaccaccgagggggtgtccaccgtcgaaggacccgacggccgcaccttcctgaag
gtggagcccgaggccctgcgcctgctcaccgagaccgcgctgcacgacatctcccactac
ctgcgcacggatcacctgaagcagctcgcgagcatcctcgacgatcccgaggcgtcgaac
aacgacaagttcgttgcactcgacctcctgaagaacgcgaacatcgccgccggcggcgtg
ctgcccatgtgccaggacaccggcaccgccatcgtcatgggcaagcgcggccagcaggtg
ctcaccccgggcgacgacgaggagtccatcgcgcggggtgtgtacgacgcgtacacgaag
ctgaacctgcggtactcgcagaacgccccgctgacgatgtgggacgagaagaacacgggc
aacaacctgccggcgcagatcgagctgtacgcggacaccgcgaagggccacgagaacgcc
tacaagttcctgttcatggccaagggcggcggatcggccaacaagtcgtacctgtaccag
gagacgaaggccatcctgaacccggactcgatgatgcagttcctcgaggccaagatccgc
tcgctcggcaccgcggcgtgcccgccctaccacctcgcgatcgtcgtcggcggcacctcc
gccgagttcgcgctcaagacggccaagtacgcctcggcgcactacctcgacgagctgccc
accgagggcgccatgacgggccgcggcttccgcgatctcgaactcgagaagaaggtcttc
gagctcacccagaagatcggcatcggcgcgcagttcggcggcaagtacttctgccacgac
gtccgcgtcgtccgcctgccgcgccacggcgcgtcgctgcccgtcgcgatcgccgtctcc
tgctcggccgaccgccaggccaaggccaagatcacccccgagggtgtcttcctcgagcag
ctcgaattcaaccccggacagttcctgcccgaggtcaccgacagccagctcgacgccgag
acgtcgggcgtctcgggcaccggcaagggtgccgcggtcaagatcgacctcacccggccg
atgccggagatcctcgccgagctgtccaagcacccggtcaagacgcgcctgtcgctcacc
ggtccgctggtcgtcgcgcgcgacatcgcgcacgcgaagatcaaggagcgcctcgaccgc
ggcgaggagatgccgcagtacctgaaggatcacccggtctactacgccggtcccgcgaag
acccccgagggtctcgcgtcgggctcgttcggcccgacgacggccggtcgcatggactcc
tacgtcgaccagttccaggccgccggcggctcgatggtgatgctcgcaaagggcaaccgc
tccaagcaggtcaccgacgcatgccacaagtacggcggcttctacctcggttcgatcggc
ggcccggccgcgcgcctggcgctcgactgcatcaagaacgtcgaggtcgtcgagtacgaa
gagctcggcatggaagcggtctggaagatcgaggtcgaggacttccccgccttcatcgtc
gtcgacgacaagggcaacgacttcttcgcgcacaccggcgaggtcacgctcacggtcggc
aagcgccccggtctgtag
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