Rhodococcus sp. PD04: U9J23_08850
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Entry
U9J23_08850 CDS
T11027
Symbol
fdh
Name
(GenBank) formate dehydrogenase
KO
K00123
formate dehydrogenase major subunit [EC:
1.17.1.9
]
Organism
rhpd Rhodococcus sp. PD04
Pathway
rhpd00630
Glyoxylate and dicarboxylate metabolism
rhpd00680
Methane metabolism
rhpd01100
Metabolic pathways
rhpd01120
Microbial metabolism in diverse environments
rhpd01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
rhpd00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
U9J23_08850 (fdh)
09102 Energy metabolism
00680 Methane metabolism
U9J23_08850 (fdh)
Enzymes [BR:
rhpd01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.9 formate dehydrogenase
U9J23_08850 (fdh)
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Gene cluster
GFIT
Motif
Pfam:
Molybdopterin
Molybdop_Fe4S4
Molydop_binding
Motif
Other DBs
NCBI-ProteinID:
WSE24371
LinkDB
All DBs
Position
complement(1920400..1923744)
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AA seq
1114 aa
AA seq
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MAEKDTSLPWPVLRQFLGKDLLGRGKAARSRRTEEIEPRTSTADRVARSVCPYCAVGCGQ
KIFVKDDKVVQIEGDPDSPVNRGRLCPKGSASKNLVTSELRETRVRYRRPYGTEWEDLDL
DTAMEMVVDRVLKTRRETWQEFDDKGHRVRRTMGIASLGGATLDNEENYLIKKLFTAMGA
VQIENQARIUHSATVPGLGTSFGRGGATGYTADLANADCIIIQGSNMAEAHPVGFQWVVE
AQKRGARVIHIDPRFTRTSAVADKHVPIRVGSDIAFLGGIVNYILSNELDFREYVVNYTN
AAVLVSDKFEDTDDLDGLFSGFDPEKRTYDPTSWQYDVEDESGDLHKSQANGSEEHAEHR
ETAAGLQNEAHGMQTASHPRRDETLQHPRCVYQVLKRHFARYTPEMVEQVCGVSQEDFLD
VCRAWTENSGRERTTALVYSVGWTQHSVGVQYIRTGAILQLLLGNMGRPGGGIMALRGHA
SIQGSTDIPTLFNLLPGYLPMPDANKHHSFTDWVDSVRNPGSKGFWSKADAYAVNLLKAY
WGDAATADNDYCFDYMPKITGDHGTYRSVLDMIDGKVKGYFLLGQNPAVGSAHGRAQRLG
MANLDWLVVRDLFEIESANFWKDSPEIETGEIVTEECATEVFLFPAASYAEKEGTFTQTQ
RMLQWREKAVEPPEDCRSELWFFYHLGRMMRERLAESTDERDRPLLDLAWDYPVHGEYDE
PSADAVLMEINGYDVATRRPLSSFTEMKNDGSTLGGCWIYTGVYADGVNQANRRKSRHEQ
SFVAPEWGWAWPMNRRILYNRASADPEGRPWSERKAYVWWDDDAQQWTGADVPDFEKTKP
PSYRSPEGADGVEALEGIDPFIMQGDGKGALYVPQGLVDGPMPTHYEPVESPFRNPLYAQ
QANPTRKEYRRDDNPMNPAPPEDHIDVFPFVFTTSRLTEHHTAGGMSRYLEHLAELQPEM
FVEVSPALAAERGLEHMGWCHVVTARSAIEGRVLVTERLRPLKVEGRTVHQVWMPYHWGS
GGMVTGDSTNDLFGITLDPNVLIQETKVGTCDVRAGRRPSGAALREYVEGYARRAGVTDH
VYPPIVTVPDGDTASDDPRAPEASDDRHPPEEDE
NT seq
3345 nt
NT seq
+upstream
nt +downstream
nt
atggcggagaaggacacgtccctcccctggcccgtcctgcgccagttcctcgggaaggat
ctgctcggacgcggcaaggccgcacggtcccgtcgtaccgaggagatcgaaccgcgcacc
tccaccgccgatcgtgtcgcccgcagcgtgtgcccctactgcgctgtcggatgcggacag
aagatcttcgtcaaggacgacaaggtcgtccagatcgagggcgatcccgacagtccggtg
aaccgcgggcgcctgtgtcccaagggttcggcgagcaagaacctcgtcaccagcgagcta
cgcgagacccgggtccgctaccgccggccctacggcaccgaatgggaagacctcgatctc
gacacggccatggagatggtcgtcgaccgcgtgctgaagacccgccgcgagacctggcag
gaattcgacgacaagggccaccgtgtccggcgcacgatgggtatcgccagtctcggcggt
gccacgctggacaacgaggagaactacctcatcaagaagctgttcacagcgatgggggcg
gtccagatcgagaatcaggcccgcatatgacactccgccaccgtccccggtctggggacc
agcttcgggcgcggcggtgccaccggctacacagccgacctggcgaacgctgactgcatc
atcatccagggttccaacatggccgaggcccacccggtgggcttccagtgggtcgtggag
gcccagaagcgtggtgcccgcgtcatccacatcgacccgcgcttcacccgtaccagcgcg
gtggcggacaagcacgtcccgatccgggtcggcagcgacatcgccttcctcggcggcatc
gtcaactacatcctgagcaacgagctggacttccgcgagtacgtcgtcaactacacgaac
gccgcggtgctcgtcagcgacaagttcgaggacaccgacgatctcgacgggctcttctcg
ggcttcgaccccgagaagcggacctacgatccgacgagctggcagtacgacgtggaggac
gaatccggcgacctgcacaagtcgcaggccaacggctccgaagagcacgccgagcatcgg
gagacggccgcgggcctgcagaacgaggcgcacggcatgcagacggcgagccacccgagg
cgcgacgagacgctgcagcacccgcggtgcgtctaccaggtgctcaagcggcacttcgcc
cgctacacccccgagatggtcgagcaggtgtgcggcgtctcgcaggaggacttcctcgac
gtctgccgcgcgtggaccgagaactccggccgggagcggacgacggcgctcgtctacagc
gtgggctggacccagcacagtgtcggtgtgcagtacatccgtaccggcgcgatcctgcag
ctgctgctcggcaacatgggccgccccggcggaggcatcatggcgctgcgcggtcacgcc
agtatccagggctcgaccgacatcccgacgctgttcaacctgttgcccggctacctgccg
atgcccgacgcgaacaagcaccactcgttcacggactgggtcgacagtgtccgcaacccc
ggaagcaagggtttctggtcgaaggccgacgcctacgccgtgaacctgctcaaggcctac
tggggcgacgcagcgaccgccgacaacgactactgcttcgactacatgccgaagatcacc
ggcgaccacggcacctaccgttcggtgctcgacatgatcgacggaaaggtcaagggctac
ttcctcctcgggcagaacccggccgtcggctccgcccacgggcgcgcccagcggctcggg
atggcgaacctcgactggctcgtggtgcgcgacctgttcgagatcgagagcgccaacttc
tggaaggactcaccggagatcgagaccggcgagatcgtgaccgaggagtgcgccaccgag
gtgttcctcttcccggcggcctcctacgccgagaaggaaggcaccttcacgcagacccag
cggatgctgcagtggcgggagaaggccgtcgagccgccggaggactgtcgctcggaactg
tggttcttctaccacctcggccgcatgatgcgggagcgtctggccgagtcgaccgacgag
cgcgaccgtccgctgctcgacctggcgtgggactaccccgtgcacggcgagtacgacgag
ccgagtgccgacgcggtgctcatggagatcaacggctacgacgtcgcaacccgccggccg
ctctcgtcgttcaccgagatgaagaacgacggctccaccctcggtggctgctggatctac
accggggtctacgccgacggcgtcaaccaggccaaccggcgcaagtcccggcacgagcag
tcgttcgtggctcccgagtggggctgggcgtggccgatgaaccgccgcattctctacaac
cgggcctccgccgaccccgagggccggccgtggagcgaacgcaaggcctacgtgtggtgg
gacgacgacgcgcagcagtggacgggtgcggacgttccggacttcgagaagacgaagccg
ccgagctatcgctcccccgaaggcgccgacggtgtcgaggcgctcgaggggatcgacccg
ttcatcatgcagggcgacggcaagggtgccctctacgtgccgcaggggctcgtcgacggt
ccgatgccgacgcactacgaaccggtggagtcgcccttccgcaacccgctctacgcgcag
caggccaacccgacgcgcaaggagtaccgccgcgacgacaacccgatgaatccggcgccg
ccggaggaccacatcgacgtgttccccttcgtgttcacgacgagccgtctcaccgagcac
cacaccgccggcggcatgagccgctatctcgaacatctcgccgaactgcaaccggagatg
ttcgtggaggtctcccccgccctggcggccgaacgcggactcgagcacatgggttggtgc
cacgtcgtcaccgcccgctccgcgatcgagggccgggtgctggtgaccgagcggttgcgc
ccgctgaaggtggagggacggaccgtccaccaggtgtggatgccctatcactggggcagc
ggcggcatggtgaccggcgactcgaccaacgatctgttcggaatcacgttggaccccaac
gtgctcatccaggagaccaaggtcggtacgtgcgacgtccgggccggacgccgaccgtcc
ggagcggcactgcgggagtacgtcgagggatatgcgcggcgggccggggtaaccgatcac
gtgtacccacccatcgtgacggtcccggacggcgatacggcctcggacgacccacgtgcc
ccggaggcttcggacgaccgacatcccccggaggaggacgagtga
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