Rhodococcus sp. PD04: U9J23_09465
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Entry
U9J23_09465 CDS
T11027
Symbol
pcaH
Name
(GenBank) protocatechuate 3,4-dioxygenase subunit beta
KO
K00449
protocatechuate 3,4-dioxygenase, beta subunit [EC:
1.13.11.3
]
Organism
rhpd Rhodococcus sp. PD04
Pathway
rhpd00362
Benzoate degradation
rhpd00624
Polycyclic aromatic hydrocarbon degradation
rhpd01100
Metabolic pathways
rhpd01120
Microbial metabolism in diverse environments
rhpd01220
Degradation of aromatic compounds
Brite
KEGG Orthology (KO) [BR:
rhpd00001
]
09100 Metabolism
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
U9J23_09465 (pcaH)
00624 Polycyclic aromatic hydrocarbon degradation
U9J23_09465 (pcaH)
Enzymes [BR:
rhpd01000
]
1. Oxidoreductases
1.13 Acting on single donors with incorporation of molecular oxygen (oxygenases)
1.13.11 With incorporation of two atoms of oxygen
1.13.11.3 protocatechuate 3,4-dioxygenase
U9J23_09465 (pcaH)
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Paralog
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Motif
Pfam:
Dioxygenase_C
PCDO_beta_N
CarboxypepD_reg
SdrD_B
DUF4198
NOMO1-like_2nd
Motif
Other DBs
NCBI-ProteinID:
WSE24484
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All DBs
Position
complement(2053758..2054489)
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AA seq
243 aa
AA seq
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MSTGEYVERDHTLHPPALTPGYRTSVLRAPRNALITPKPTLSEITGPVFRSDELGALDND
LILNFSKDGLPIGERIIVHGFVKDEFDNPVEGALVEVWQANAGGRYRHKKDTYLAPIDPN
FGGCGRMLTDANGYYQFRTIKPGAYPWGNSRNAWRPAHIHVSILGRGWAQRLITQLYFEG
DPLIEKCPIARTIPTVDQLRSLIAQEDPASNAPFDARAYRWDITLRGRRAAFFENTDLPG
APR
NT seq
732 nt
NT seq
+upstream
nt +downstream
nt
atgtccaccggcgaatacgtcgagcgcgaccacacactgcacccacccgcgctcactccc
ggctaccgcacgtcggtgctgcgcgcaccgcgcaacgcgctcatcacgccgaagccgacg
ctgtcggagatcaccggacccgtcttccgcagcgacgagctcggcgccctcgacaacgac
ctgatcctgaacttctcgaaggacggcctgccgatcggtgagcgcatcatcgtccacggc
ttcgtcaaggacgagttcgacaatccggtcgagggcgcactcgtcgaggtgtggcaggcc
aacgccggtggccggtaccgccacaagaaggacacctatctcgctcccatcgatccgaac
ttcggcggttgcggacggatgctcacggacgcgaacggctactaccagttccggacgatc
aaacccggcgcatatccgtggggcaacagccgcaacgcctggcgcccggcgcacatccac
gtgtcgatcctcggccgcgggtgggcgcagcgcctgatcacgcagctgtacttcgagggc
gacccgctcatcgagaagtgcccgatcgcgcggacgatcccgacagtggaccagctccgc
agcctgatcgcccaggaggatcccgcctccaatgctccgttcgacgcccgcgcctaccgc
tgggacatcaccctgcgcggtcgccgcgccgccttcttcgagaacaccgacctcccggga
gccccgcgatga
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