Rhodococcus sp. PD04: U9J23_09515
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Entry
U9J23_09515 CDS
T11027
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
rhpd Rhodococcus sp. PD04
Pathway
rhpd02024
Quorum sensing
rhpd03060
Protein export
rhpd03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
rhpd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
U9J23_09515 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
U9J23_09515 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
U9J23_09515 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
rhpd02044
]
U9J23_09515 (ffh)
Enzymes [BR:
rhpd01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
U9J23_09515 (ffh)
Secretion system [BR:
rhpd02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
U9J23_09515 (ffh)
Eukaryotic Sec-SRP protein
U9J23_09515 (ffh)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
CbiA
cobW
ArsA_ATPase
APS_kinase
nSTAND3
AAA_22
Zeta_toxin
AAA_30
AAA_18
NPHP3_N
Thymidylate_kin
TsaE
AAA_33
TctA
AAA_16
NTPase_1
MeaB
6PF2K
AAA_24
ATP_bind_1
MobB
YdhS_M
hnRNP_Q_AcD
NACHT
Motif
Other DBs
NCBI-ProteinID:
WSE24494
LinkDB
All DBs
Position
2067120..2068688
Genome browser
AA seq
522 aa
AA seq
DB search
MFESLSDRLTGVLKDLRGKGRLSDADIDATCREIRLALLEADVALPVVREFIKKIKVRAK
GAEVHGALNPAQQVVKIVNEELVGILGGETRRLQFAKTPPTVIMLAGLQGAGKTTLAGKL
AKWLKAQGHTPMLVACDLQRPGAVTQLQVVGERAGVTVFAPHPGTSIGGGENELGVTAAD
PIAVAEQGIAEARNKQYDVVIVDTAGRLGIDQELMAQAAGIRDAVQPDEVLFVLDAMIGQ
DAVSTAEAFREGVGFTGVVLTKLDGDARGGAALSVRELTGQPIMFASTGEKLEDFDVFHP
ERMASRILGMGDVLTLIEQAEQVFDAQQAEATASKIGSGELTLEDFLEQMMAVRKMGPIA
NLLGMLPGAGQMKDALANVDEKQLDRIQAIIRGMTPEERANPKIINGSRRLRIANGSGVK
VSDVNQLVDRFFEARKMMTAMAGQMGMPGARKNQRKKGKKGKKGGRGPTPPKVRGGMPGG
FPGLPGGMPAGMPDLSKMPKGLDELPPGLENFDLSKLKFPKN
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
gtgttcgaatccctttccgacaggttgacaggggtcctgaaggacctgcgcggcaagggg
cggctgtccgacgcggacatcgacgcgacctgccgtgagatccgcctcgccctgctcgag
gccgacgtcgcactgcccgtggtgcgcgagttcatcaagaagatcaaggtgcgcgccaag
ggcgccgaggtgcacggcgcgctcaacccggcccagcaggtcgtcaagatcgtcaacgag
gaactcgtcgggatcctcggtggcgagacccgtcggctgcagttcgcgaagaccccgccg
acggtcatcatgctcgccggtctgcagggcgccggtaagaccaccctcgcgggcaagctc
gcgaagtggctcaaggcgcaggggcacaccccgatgctggtcgcctgcgacctccagcgc
cccggcgcggtgacccagctgcaggtggtcggtgagcgtgccggcgtgacggtcttcgct
ccgcatcccggcacctccatcggcggtggcgagaacgagctcggcgtcaccgccgccgac
ccgatcgccgtggcagagcagggcatcgccgaggcacgcaacaagcagtacgacgtggtc
atcgtcgacaccgccggtcgtctcggcatcgaccaggaactcatggcgcaggccgcgggc
atccgcgacgcggtgcagcccgacgaggtgctgttcgtcctcgacgcgatgatcggtcag
gacgccgtgagcaccgccgaggcgttccgcgagggcgtcggcttcaccggcgtggtgctc
accaagctcgacggcgacgcccgcggtggtgccgcgctgagcgtccgcgagctcaccggc
cagccgatcatgttcgcctccaccggtgagaagctcgaggacttcgacgtcttccacccc
gagcgcatggccagccgcatcctcggcatgggcgacgtgctcaccctgatcgagcaggcc
gagcaggtcttcgacgcccagcaggccgaggccaccgccagcaagatcggttccggtgag
ctcaccctcgaggacttcctcgagcagatgatggcagtgcggaagatgggccctatcgcc
aatctcctgggcatgctgcccggagccgggcagatgaaggacgccctcgccaacgtcgac
gagaagcagctcgaccgcatccaggcgatcatccgcggcatgacgccggaggagcgcgcc
aacccgaagatcatcaacggctcgcggcgactgcgcatcgccaacggttccggtgtgaag
gtctccgacgtcaaccagctcgtcgaccggttcttcgaggcccggaagatgatgacggcg
atggccggccagatgggcatgccgggcgcacgcaagaaccagcgcaagaagggcaagaag
gggaagaagggcggtcgcggaccgacgccgccgaaggtgcggggcggtatgcccggtggc
ttccccggtcttccgggtggcatgccggccgggatgcccgacctgtcgaagatgccgaag
ggcctcgacgagctgcctccgggtctcgagaacttcgacctgtcgaagctgaagttcccc
aagaactga
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