Rhodococcus sp. PD04: U9J23_10080
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Entry
U9J23_10080 CDS
T11027
Symbol
miaB
Name
(GenBank) tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
rhpd Rhodococcus sp. PD04
Brite
KEGG Orthology (KO) [BR:
rhpd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rhpd03016
]
U9J23_10080 (miaB)
Enzymes [BR:
rhpd01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
U9J23_10080 (miaB)
Transfer RNA biogenesis [BR:
rhpd03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
U9J23_10080 (miaB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
Motif
Other DBs
NCBI-ProteinID:
WSE24593
LinkDB
All DBs
Position
2181275..2182804
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AA seq
509 aa
AA seq
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MSLIDEEAPRTGARTYEVRTYGCQMNVHDSERLSGLLEDAGFTKAAPGASPDLVVFNTCA
VRENADNKLYGNLSHLRPVKDDNPDMQIAVGGCLAQKDRDTVVKKAPWVDVVFGTHNIGN
LPALLERARHNRRAEVEILDALEAFPSTLPAKRESSYAGWVSISVGCNNTCTFCIVPSLR
GKEVDRRPGDILAEVQALVDEGVLEVTLLGQNVNSYGRSFADPEQPRDRGAFASLLRACG
DIEGLERVRFTSPHPAEFTDDVIDAMAQTPNVCPQLHMPLQSGSDRILRAMRRSYRKERF
LGIIERVRAAMPHAAITTDIIVGFPGETEEDFQQTLEVVEKARFTSAFTFQYSKRPGTPA
ADMEGQVPKAVVQERYDRLIALQERITLEENRKLVGTEVELLVAAGEGRKNAETARMSGR
ARDGRLVHFRPEGAIDTSVRPGDVVTIVVSDAAPHHLVADTPILTHRRTRAGDHFEQGRL
PKTPPIGVGLGLPSIGVPDPLPPQMGCNA
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
gtgtcactgatcgacgaagaagccccccgtaccggtgcccggacctacgaggtccgcacc
tacggctgtcagatgaacgtacacgactccgagcgtctgtcggggttgttggaggacgcc
ggcttcaccaaggccgcgcccggtgcgtcacccgatctggtggttttcaacacctgcgcg
gtgcgggagaacgccgacaacaagctgtacggcaatctgagtcatctgcgtccggtcaag
gacgacaaccccgacatgcagatcgctgtcggaggctgcctcgcccagaaggaccgcgac
acggtcgtcaagaaggcgccctgggtcgacgtggtcttcggcacacacaacatcggtaat
ctccccgccctgctcgaacgcgcacggcacaaccgccgcgccgaggtcgagatcctcgac
gccctcgaggcgttcccgtcgacgctgcccgccaagcgtgagtcgtcgtacgccggatgg
gtgtcgatctccgtcggctgcaacaacacgtgcaccttctgcatcgtgccgtcgctgcgc
ggcaaggaggtcgaccggcgcccgggcgacatcctcgccgaggtgcaggcgctcgtcgac
gagggcgtgctcgaggtgacactgctcggccagaacgtcaactcctacggccggtccttc
gccgatccggagcagccccgcgaccggggcgccttcgcgtcgctgctgcgcgcgtgcggc
gacatcgaggggctcgagcgggtgcgcttcacctccccgcacccggcggagttcaccgac
gacgtcatcgacgccatggcgcagacccccaacgtgtgcccgcagctgcacatgccgctg
cagtccggcagcgatcggatcctgcgcgccatgcgccgctcgtaccgcaaggaacgcttc
ctgggcatcatcgagcgggtccgtgccgcgatgccgcacgcggcgatcaccaccgacatc
atcgtcggcttccccggtgagaccgaggaggacttccagcagaccctcgaggtcgtcgag
aaggcgcgcttcaccagcgcgttcaccttccagtactcgaagcgccccggcacgcccgca
gccgacatggaggggcaggtccccaaggccgtggtgcaggagcgttacgaccgtctgatc
gcgctgcaggaacgcatcaccctcgaggagaaccgcaaactcgtcggcaccgaggtcgaa
ctgctcgtcgcagcgggggagggccgcaagaacgccgagaccgcccggatgagcgggcgt
gcccgcgacggccgcctcgtccacttccgtcccgagggcgcgatcgacacctcggtgcgt
cccggcgacgtcgtcacgatcgtcgtcagcgacgccgcgccgcaccacctcgtcgcggac
accccgatcctcacgcaccgccgcacacgtgcgggcgaccacttcgaacagggccggctg
cccaagacaccgccgatcggtgtcggactcggactgccgagcatcggcgtcccggacccg
ctgccgcctcagatgggatgcaacgcatga
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