Rhodococcus sp. PD04: U9J23_10895
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Entry
U9J23_10895 CDS
T11027
Symbol
carB
Name
(GenBank) carbamoyl-phosphate synthase large subunit
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
rhpd Rhodococcus sp. PD04
Pathway
rhpd00220
Arginine biosynthesis
rhpd00240
Pyrimidine metabolism
rhpd00250
Alanine, aspartate and glutamate metabolism
rhpd01100
Metabolic pathways
rhpd01110
Biosynthesis of secondary metabolites
rhpd01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
rhpd00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
U9J23_10895 (carB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
U9J23_10895 (carB)
00220 Arginine biosynthesis
U9J23_10895 (carB)
Enzymes [BR:
rhpd01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
U9J23_10895 (carB)
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Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
CPSase_L_D1
CPSase_L_D3
MGS
Dala_Dala_lig_C
ATP-grasp
ATPgrasp_Ter
ATP-grasp_3
ATP-grasp_4
Motif
Other DBs
NCBI-ProteinID:
WSE24735
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All DBs
Position
2351203..2354547
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AA seq
1114 aa
AA seq
DB search
MPRRTDLSHVLVIGSGPIVIGQACEFDYSGTQACRVLREEGLRVSLVNSNPATIMTDPEF
ADSTYIEPITADYVEKVIATEQANGTPIDAVLATLGGQTALNTAVALSERGILDKYDVEL
IGADFDAIQRGEDRQKFKDIVAKCGGESARSAVCYTMDEVRATVAELGFPVVVRPSFTMG
GLGSGMAYDDADLERIAGGGLAASPTANVLIEESILGWKEYELELMRDGADNVVIVCSIE
NVDPVGVHTGDSVTVAPAMTLTDREYQKMRDLSIAILREVGVDTGGCNIQFAMDPRDGRL
VVIEMNPRVSRSSALASKATGYPIAKMAAKLAIGYTLDEIVNDITKETPACFEPSLDYVV
VKAPRFAFEKFPGADGTLTTTMKSVGEAMSIGRNFSEAFGKVLRSLETKSAGFWTGPEVE
GTLDEILEEIRTPTDGRFYRIARALELGATVEQLFDATKIDPWFLEQFAHIVELGQDVRN
AEQFGATELRYAKHHGFSDRQIAALRPAQFASEDEVRALRQELGIHPVYKTVDTCAAEFE
AKTPYHYSTYELDPAAETEVAEQRDKPKVLILGSGPNRIGQGIEFDYSCVHAALTLSEAG
YETVMVNCNPETVSTDYDTADRLYFEPLTFEDVLEVYRAECESGTVAGVIVQLGGQTPLG
LARRLKAAGVPIVGTSPEAIDLAEDRGEFGRVLDEADLPAAKYGTATTFEGAREIAAGIG
YPVLVRPSYVLGGRGMEIVYDEKALETYISNATEISDDRPVLVDRFLDDAVEIDVDALCD
GTDVYIGGIMEHIEEAGIHSGDSACALPPITLGRSDIENVRRSTAALAKGIGVKGLLNVQ
YALKDDILYVLEANPRASRTVPFVSKATAVQLAKACARVMLGESIAELRAVGILPAEGDG
SDIPLDAPVAVKEAVLPFNRFRRADGTGIDTLLSPEMKSTGEVMGLDDDFGTAFAKSQTA
AYGSLPTSGTVFVSLANKDKRSMIFPVKHLADLGFHIMATVGTAEVLRRNGVPCEQVHKV
SGEDKPEGALDVVDRIRAGDVDMVINTPWGNAGPRVDGYEIRSAAVAANIPCITTVQGAS
AAVQGIEAALRGEIGVSSIQRMHARLRGVPAEQA
NT seq
3345 nt
NT seq
+upstream
nt +downstream
nt
atgccacgccgtaccgatctctcccacgtcctggtcatcgggtccggcccgatcgtcatc
ggacaggcctgcgagttcgactactcgggcacccaggcgtgccgggtgctccgcgaggag
ggcctgcgcgtctccctggtcaactcgaacccggccacgatcatgaccgaccccgagttc
gccgactcgacctacatcgagccgatcaccgccgactacgtcgagaaggtcatcgcgacc
gagcaggccaacggcaccccgatcgacgcggtgctcgcaaccctcggcggccagaccgcc
ctcaacaccgccgtcgccctgtccgagcgcggcatcctcgacaagtacgacgtcgaactc
atcggcgccgacttcgacgcgatccagcgcggcgaggatcggcagaagttcaaggacatc
gtcgccaagtgcggcggcgagtccgcccgctcggccgtctgctacacgatggacgaggtc
cgcgcgaccgtcgccgaactcggcttcccggtcgtcgtgcgcccctccttcacgatgggt
ggcctcggctccggcatggcctacgacgatgccgacctcgagcgcatcgccggtggcggg
ctcgcggcctcgcccaccgcgaacgtgctcatcgaggagtccatcctcggctggaaggaa
tacgagctcgagctcatgcgcgacggcgccgacaacgtcgtcatcgtctgctcgatcgag
aacgtcgacccggtcggtgtgcacaccggcgactcggtgaccgtcgcacccgcgatgacg
ctcaccgaccgcgagtaccagaagatgcgcgacctctcgatcgccatcctgcgcgaggtc
ggtgtcgacaccggcggctgcaacatccagttcgcgatggatccgcgcgacggccggctc
gtcgtcatcgagatgaacccgcgcgtgtcgcggtcgtcggccctcgcgtcgaaggccacc
ggctacccgatcgcgaagatggccgccaagctcgccatcggctacacgctcgacgagatc
gtcaacgacatcaccaaggagaccccggcctgcttcgaaccgagcctcgactacgtcgtg
gtcaaggccccacggttcgccttcgagaagttccccggcgccgacggcaccctcaccacc
accatgaagtcggtcggtgaggccatgtcgatcggccgcaacttctccgaggccttcggc
aaggtgctgcgctcgctcgagacgaagtccgccggcttctggacgggccccgaggtcgag
ggcaccctcgacgagatcctcgaggagatccgcacccccacggacggccggttctaccgg
atcgcccgggccctggagctcggtgcgaccgtcgagcagctcttcgacgccacgaagatc
gacccgtggttcctcgagcagttcgcgcacatcgtcgagctgggccaggacgtccgcaac
gccgagcagttcggtgccaccgagctgcgctacgcgaagcaccacggcttctccgaccgg
cagatcgcggccctgcgcccggcacagttcgcctccgaggacgaggtgcgcgccctgcgt
caggagctggggatccacccggtctacaagaccgtggacacctgcgccgccgagttcgag
gccaagacgccgtaccactactcgacctacgaactcgaccccgcggccgagaccgaggtc
gcggagcagcgcgacaagccgaaggtgctcatcctcggctccggcccgaaccgcatcggc
cagggcatcgagttcgactactcgtgcgtgcacgccgcgctgacgctgtccgaggccggc
tacgagaccgtgatggtcaactgcaaccccgagacggtctcgaccgactacgacaccgcc
gatcgcctgtacttcgagccgctgaccttcgaggacgtcctcgaggtctaccgcgccgag
tgcgagtccggcaccgtcgccggcgtcatcgtccagttgggcggccagaccccgctcggc
ctggcgcgtcgcctgaaggccgccggggtgccgatcgtcggtacctcgcccgaggccatc
gacctcgcggaggaccgcggcgagttcggtcgcgtgctcgacgaggccgacctgccggcc
gcgaagtacggcacggccaccaccttcgagggtgcgcgcgagatcgccgccggcatcgga
tacccggtgctggtgcgcccgtcctacgtgctcggtggtcgcggcatggagatcgtctac
gacgagaaggctctcgagacctacatctccaacgcgaccgagatctccgacgaccgcccc
gtgctcgtcgaccgcttcctcgacgacgccgtcgagatcgacgtcgacgcgctgtgcgac
ggcaccgacgtgtacatcggcgggatcatggagcacatcgaggaggccggcatccactcc
ggcgactcggcctgtgcgctgccgccgatcaccctgggccgctccgacatcgagaacgtg
cgccgctcgacggcggcgctcgcgaagggcatcggtgtcaagggcctgctcaacgtccag
tacgcgctcaaggacgacatcctgtacgtcctcgaggcgaacccccgtgcctcccgcacg
gtgccgttcgtgtccaaggccaccgcggtgcagctcgccaaggcctgcgcccgggtgatg
ctcggcgagtccatcgccgaactgcgtgccgtcggcatcctccccgccgagggcgacggc
agcgacatcccgctcgatgcaccggtcgcggtgaaggaagcggtgctgcccttcaaccgg
ttccggcgtgccgacggcacgggcatcgacaccctgctcagcccggagatgaagtccacc
ggtgaggtcatgggcctcgacgacgacttcggaaccgcgttcgcgaagagccagaccgcc
gcctacggctccctgccgacctcgggcacggtcttcgtctcgctcgcgaacaaggacaag
cggtcgatgatcttcccggtcaagcacctcgccgacctgggattccacatcatggccacc
gtgggaaccgcagaggtgctgcgccgcaacggtgttccgtgcgagcaggtccacaaggtc
tccggcgaggacaagccggaaggcgcgctcgacgtcgtcgaccgcatccgcgccggcgac
gtggacatggtcatcaacacgccctggggcaacgccggtccgcgcgtggacggttacgag
atccgcagcgcggcggtcgccgcgaacatcccgtgcatcaccacggtgcagggtgcctcc
gcggccgtgcagggtatcgaggcggcgctgcgcggtgagatcggagtcagctcgatccag
cggatgcacgcgcggctgcgcggcgtgcccgccgagcaggcgtga
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