Rhodococcus sp. PD04: U9J23_12570
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Entry
U9J23_12570 CDS
T11027
Name
(GenBank) long-chain fatty acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
rhpd Rhodococcus sp. PD04
Pathway
rhpd00061
Fatty acid biosynthesis
rhpd00071
Fatty acid degradation
rhpd01100
Metabolic pathways
rhpd01212
Fatty acid metabolism
rhpd02024
Quorum sensing
rhpd04146
Peroxisome
Module
rhpd_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
rhpd00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
U9J23_12570
00071 Fatty acid degradation
U9J23_12570
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
U9J23_12570
09145 Cellular community - prokaryotes
02024 Quorum sensing
U9J23_12570
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
rhpd01004
]
U9J23_12570
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rhpd04147
]
U9J23_12570
Enzymes [BR:
rhpd01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
U9J23_12570
Lipid biosynthesis proteins [BR:
rhpd01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
U9J23_12570
Exosome [BR:
rhpd04147
]
Exosomal proteins
Exosomal proteins of breast milk
U9J23_12570
Exosomal proteins of breast cancer cells
U9J23_12570
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_3
TPR_16
Motif
Other DBs
NCBI-ProteinID:
WSE20566
LinkDB
All DBs
Position
complement(2715691..2717349)
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AA seq
552 aa
AA seq
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MTIYDDKVWLSQYDAAQRQPRTIEFDDALAMFRATVERDPDADIIRYFDGRITAGELDEL
SDAFAAGILDAGFRPGERVAIYAQNVPQFVIAQLGTWKAGGIAVSANPMYRERELEEILR
DSGATVLVALQSLYTDVAAKVVESTAVRTVITTSELEYQSANSGTLGGVERIECAGTTDM
TEMLMAFRGRTVPPAEIGPDTVAFLTYTSGTTGPPKGAMTTHRNVAFNAQTYRDWIDIGP
DDVVLGVAPLFHITGLVGHIALSLLTGAPLVLMYRMDAADTIDTIEKQRATFTVGSITVF
IALMNAPNASKEALASLTKIYSGGAPIPPSTIAAFEERFGHYIHNIYGLTETTSPSHGVP
LGRRAPVDELTGATSVGVPVYDTVVRIVDDNGNDLPPGEVGELVTAGPQVVAGYWNNPEA
TANSIPNGVLHTGDVGYMDSDGWFYIIDRKKDQINASGYKVWPREVEDVLYEHDAVREAA
VVGVPDEYRGETVKAFVSLRPGATVTPDELIAFTKKRLAAYKCPRFVEIISDIPKTATGK
LLRRELRTATQS
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
atgaccatctatgacgacaaggtgtggttgtcgcagtacgacgctgcgcagcggcaacca
cgcacgatcgaattcgacgacgcgctggcgatgttccgggcgaccgtcgaacgcgatccg
gacgccgacatcatccgctacttcgacggccggatcaccgcaggtgaactcgacgaactg
agcgacgcattcgccgccggaatcctcgacgcagggttccggccgggtgaacgggtcgcg
atctatgcacagaacgtgccccagttcgtcatcgcccaactcggaacgtggaaggccggc
ggcatcgccgtgtccgccaatccgatgtaccgcgaacgcgaactcgaggagatcctgcgc
gactccggtgccacggtcctggtcgcgctgcaatccctctacaccgatgtagcagcgaag
gtcgtcgagtcgaccgccgtgcgcaccgtgatcacgacgtcggaactcgagtaccagagt
gcgaacagcggcaccctcggcggtgtcgaacgcatcgagtgcgcgggcaccacggacatg
acggagatgctcatggccttccgtggccggaccgtgccgcctgctgagatcggccccgac
acggtcgctttcctgacgtacacctccgggaccaccggcccaccgaagggcgcgatgacc
acccaccgcaacgtggcgttcaacgcgcagacctaccgggactggatcgacatcggtcca
gacgacgtcgtcctcggcgtcgcaccgctgttccacatcaccgggctcgtcggccacatc
gccctgtcgctgctgaccggtgcaccgctggtgctgatgtaccgcatggatgcggccgac
accatcgacaccatcgagaagcaacgcgccacgttcaccgtggggtcgatcacggtgttc
atcgcgttgatgaacgctccgaacgcgagcaaggaggccctggcgagcctgaccaagatc
tattcgggtggcgcgccgatcccgccgagcaccatcgcggcgttcgaggagaggttcggt
cactacatccacaacatctacggcctcaccgagacgacctccccgtcacacggggtgccg
ctcggcaggcgggctccggtcgacgagctgaccggagcgacctccgtgggcgtgccggtc
tacgacaccgtcgtgcggatcgtcgacgacaacggcaacgatcttcccccgggcgaggtc
ggggagctcgtgacggcgggaccgcaggtggtggcggggtactggaacaaccccgaggcc
acggcgaactcgatcccgaacggcgtgctgcacaccggcgatgtcggctacatggacagc
gacggctggttctacatcatcgaccgcaagaaggaccagatcaacgccagtggctacaag
gtctggcctcgcgaggtcgaggacgtgctctacgaacacgacgccgttcgcgaagcagcg
gtggtgggtgtacccgacgagtaccgaggggagactgtcaaagctttcgtcagcctccgc
cccggagccacggtcacgcccgatgagctgatcgcgttcacgaagaagcgactggcggcc
tacaagtgcccacgcttcgtcgagatcatctccgacatccccaagacggcgacgggcaaa
ctgctgcgccgcgagctacgaacggcgacccagtcctga
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