Rhodococcus sp. PD04: U9J23_13410
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Entry
U9J23_13410 CDS
T11027
Name
(GenBank) TlyA family RNA methyltransferase
KO
K06442
23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:
2.1.1.226
2.1.1.227
]
Organism
rhpd Rhodococcus sp. PD04
Brite
KEGG Orthology (KO) [BR:
rhpd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rhpd03009
]
U9J23_13410
Enzymes [BR:
rhpd01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.226 23S rRNA (cytidine1920-2'-O)-methyltransferase
U9J23_13410
2.1.1.227 16S rRNA (cytidine1409-2'-O)-methyltransferase
U9J23_13410
Ribosome biogenesis [BR:
rhpd03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
U9J23_13410
23S rRNA modification factors
U9J23_13410
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FtsJ
S4
Methyltransf_12
Methyltransf_25
Methyltransf_11
Methyltransf_23
Motif
Other DBs
NCBI-ProteinID:
WSE20723
LinkDB
All DBs
Position
complement(2904115..2904939)
Genome browser
AA seq
274 aa
AA seq
DB search
MARRARVDAELVRRGLARSREHASELIAAGRVLIAGTVASKPATAVEPNTPLIVTEVSDE
VSWASRGAHKLLGALEAFTPQGLQVSGRRCLDAGASTGGFTDVLLHEGAAEVVAVDVGYG
QLIWRLQSDERVHVIDRTNVRSIDAETIGGRVDLVVADLSFISLKLVLPAFVACVAPGGD
LLPMVKPQFEVGKDRVGSGGVVRDQALRTEAVLDVAREAQRQGLRTLGAVASPLPGPSGN
VEYFLWLRAGESGPEELDPAVIELIERAVQEGPQ
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
gtggcacgccgggcacgcgtcgacgcggaactggtgcggcggggtctggcgcgctcgcgt
gagcacgccagcgaactgatcgccgcaggtcgggtgctgatcgccggcaccgtggcctcc
aaaccggcgaccgctgtcgaaccgaacacgccgttgatcgtcaccgaggtgagcgacgag
gtctcctgggcgtcccgcggcgcccacaaactcctcggcgcactcgaggcgttcacaccg
cagggtttgcaggtgtcggggcgtcgctgcctcgacgccggcgcgtcgaccggcggattc
accgatgtcctgttgcacgagggtgccgcggaggtcgtcgccgtggacgtcggctacggc
cagctgatctggcgcctgcagtccgacgagcgtgtccacgtgatcgatcgaacaaatgtg
cgtagcatcgacgcggagacgatcggcgggcgcgtcgacctggtggtcgcagacctgtcg
ttcatctcgctgaagttggtgttgccggcgttcgtcgcctgcgtcgcccccggcggcgac
ctgctaccgatggtcaaaccgcagttcgaggtgggcaaggaccgggtcggcagcggtggc
gtggtgcgcgaccaggcgctgcgcaccgaggcggtgctcgacgtcgcgcgcgaagcacag
cgtcagggcctgcgcaccctcggagcagtggcgagcccactgcccgggccgtccgggaac
gtcgagtacttcctgtggctgcgggccggggagtctgggccggaggaactcgacccagcc
gtgatcgaactgatcgagcgtgcggtgcaggaaggaccacagtga
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