Rhodococcus sp. PD04: U9J23_13690
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Entry
U9J23_13690 CDS
T11027
Symbol
rpsA
Name
(GenBank) 30S ribosomal protein S1
KO
K02945
small subunit ribosomal protein S1
Organism
rhpd Rhodococcus sp. PD04
Pathway
rhpd03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
rhpd00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
U9J23_13690 (rpsA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
rhpd03011
]
U9J23_13690 (rpsA)
Ribosome [BR:
rhpd03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
U9J23_13690 (rpsA)
Bacteria
U9J23_13690 (rpsA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
S1
S1_RRP5
Spt6_S1
S1_2
DUF2110
RNase_II_C_S1
EFTUD2
Caudal_act
Motif
Other DBs
NCBI-ProteinID:
WSE20774
LinkDB
All DBs
Position
complement(2970605..2972065)
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AA seq
486 aa
AA seq
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MASTTVTSPQVAVNDIGSAEDFLAAIDATIKYFNDGDIVEGTIVKVDRDEVLLDIGYKTE
GVIPSRELSIKHDVDPNEVVSVGDEVEALVLTKEDKEGRLILSKKRAQYERAWGTIEELK
EKDEAVKGTVIEVVKGGLILDIGLRGFLPASLVEMRRVRDLQPYVGKEIEAKIIELDKNR
NNVVLSRRAWLEQTQSEVRSEFLHQLQKGQVRKGVVSSIVNFGAFVDLGGVDGLVHVSEL
SWKHIDHPSEVVEVGTEVTVEVLDVDLDRERVSLSLKATQEDPWRQFARTHAIGQIVPGK
VTKLVPFGAFVRVEEGIEGLVHISELAERHVEVPDQVVAVGDDAMVKVIDIDLERRRISL
SLKQANEDYTAEFDPSKYGMADSYDEQGNYIFPEGFDPETNEWLEGYEKQREEWESRYAE
AERRHKMHTAQIEKMAADEAAEAAAGVSGSNYSSESGAEAAPETTGGSLASDAQLAALRE
KLSGNA
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atggcctccaccaccgtcacctcgccgcaggtagccgtcaacgacatcggctccgccgag
gatttcctcgccgccatcgacgccacgatcaagtacttcaacgatggcgacatcgtcgag
ggcaccatcgtcaaggtcgatcgcgacgaggtgctgctcgacatcggttacaagaccgaa
ggcgtcatcccgtcccgcgagctctccatcaagcacgatgtcgaccccaacgaggtcgtg
tcggtgggcgatgaggtcgaggctcttgttctcaccaaggaggacaaggaaggccgtctg
atcctgtccaagaagcgtgctcagtacgagcgcgcctggggcacgatcgaggagctcaag
gagaaggacgaggccgtcaagggcaccgtcatcgaggtcgtcaagggcggcctgatcctc
gacatcggcctgcgtggcttcctgcccgcgtcgctcgtcgagatgcgtcgcgtccgcgac
ctccagccttacgtcggcaaggagatcgaggccaagatcatcgagctcgacaagaaccgc
aataacgtggtcctgtcgcgccgcgcatggctcgagcagacccagtccgaggtccgcagc
gagttcctgcaccagctccagaagggccaggtccgcaagggcgtcgtgtcctccatcgtc
aacttcggcgccttcgtcgatctcggcggtgtcgacggcctcgtgcacgtctccgagctg
tcctggaagcacatcgatcacccgtccgaggtcgtcgaggtcggcaccgaggtcaccgtc
gaggttctcgacgtcgatctcgaccgcgagcgtgtctccctgtcgctcaaggcgacgcag
gaagatccgtggcgtcagttcgcccgcacccacgcgatcggtcagatcgtgccgggcaag
gtcaccaagctcgttccgttcggcgcgttcgtccgcgtcgaggagggcatcgagggcctc
gtccacatctccgagctggccgagcgccacgtcgaggtcccggaccaggtcgttgccgtc
ggcgacgacgcgatggtcaaggtcatcgacatcgacctcgagcgtcgtcgtatctcgctg
tcgctgaagcaggcgaacgaggactacacggccgagttcgacccgtcgaagtacggcatg
gccgacagctacgacgagcagggcaactacatcttccccgagggcttcgatcccgagacc
aacgaatggctcgagggctacgagaagcagcgtgaggagtgggagtcccgctacgcggag
gccgagcgtcgccacaagatgcacaccgctcagatcgagaagatggctgccgacgaggct
gccgaggctgcagccggcgtgtccggtagcaactactcctccgagtcgggtgccgaggcg
gctccggagaccaccggtggatcgctcgcgagcgacgcccagctcgccgctctgcgcgag
aagctgtcgggtaacgcctga
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