Rhodococcus sp. PD04: U9J23_16600 Help Entry U9J23_16600       CDS       T11027                                  Name (GenBank) ATP-dependent helicase   KO K03724   ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4] Organism rhpd  Rhodococcus sp. PD04 Brite KEGG Orthology (KO) [BR:rhpd00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:rhpd03400]     U9J23_16600 Enzymes [BR:rhpd01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.4  DNA 3'-5' helicase      U9J23_16600     5.6.2.6  RNA 3'-5' helicase      U9J23_16600 DNA repair and recombination proteins [BR:rhpd03400]  Prokaryotic type   Other factors with a suspected DNA repair function    DNA helicases     U9J23_16600 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DEAD_assoc WHD_Lhr WHD_2nd_Lhr WHD_4th_Lhr WHD_3rd_Lhr DEAD Helicase_C ResIII AAA_25 DUF6406 AbiEi_4 Helicase_C_3 SHOCT Motif Other DBs NCBI-ProteinID:  WSE21296 LinkDB All DBs Position 3588591..3593153 Genome browser AA seq 1520 aa AA seqDB search MVTDILDRFSAPTRAWFAGAFESPTPAQLGAWDSISSGAHTLVVAPTGSGKTLSAFLWSL DRLSSTPADEHAAREHRTRVLYVSPLKALAVDVERNLRSPLVGITQTAKRLGLTPPDITV GVRSGDTSQADRRALARTPPDILITTPESLFLMLTSSARENLVGVETVIVDEVHAVAGTK RGAHLALSLERLDQLLRAPAQRIGLSATVRPHEEVGRFLAGSAPIRIVAPPSAKTWDLTV RVPVEDMTELGVSEPDEESFSPSPQAGSIWPHVEEQIVDLITEHRSTIVFANSRRLSERL TARLNEIHAERLGEEVDREGAPPSQLGSPTETTAGAAPVLARAHHGSVSKDQRALIEDDL KSGRLRCVVATSSLELGIDMGAVDLVIQVEAPPSVASGLQRVGRAGHQVGETSRGVLFPK HRTDLVHCAVTVERMVEGHIEALQVPANPLDVLAQQTVAATALEPIDVDDWFDTVRRSGS FATLSRGVYESVLDLLAGRYPSDEFAELRPRVVWDRTAGTLTGRPGAQRLAVTSGGTIPD RGLFTVYMVGEKNTRVGELDEEMVYESRVGDVFALGATSWRIEEITFDRVLVSPAYGRPG RLPFWHGDSQGRPAELGAALGAFLREMGHASPEDAETRCRKGGLDDYATGNLIRLLDEQR TATGHLPTDRTLVVERFRDELGDWRLVLHSPFGLRVHAPWALAVGARLLERYGVESHPTP SDDGIIVRLPDTDDAPPGSEIFVFDTEEIDDIVTEQVGGSALFASRFRECAARALLLPRR NPGKRAPLWQQRQRSAQLLDVARRYPDFPILLETVRECLQDVYDLPALRDLLGSIAQRKI RLVEVETPTASPFATSLLFSYVGEFLYEGDSPLAERRAAALSLDSTLLAELLGRVELREL LDADVITEAEHELQRLTPQRRARDAEGVADLLRLLGPLTDAELRERTTDDPTPWIEDLET QRRALRVSYAGEHRWAAIEDASRLRDALGVPLPIGVPTVFVEPVPDPLGDLIARHARTHG PFTTAQAAARFGLGTAVVESVLERLASEKRVTAGEFRPGASGSEWCDTEVLRRLRRRSLA AARQDVEPVSTTTLGRFLPDWHHLGTGPGTSALYGIDGVLTVVEQLAGVPVPASALEPLI LAPRVRDYTPTMLDELTTTGEVLWSGAGSISGKDGWVALHPADLAPVSLAPVDDIELGPV HQAILESLSGGGAFFFRQLVDAVTTLHTTASDTTVADALWELVWSGHVAGDTLAPLRALI GDTSRAKPAHRTPRRAPRARMYRARPTLPSRTGPPTVSGRWSMLPERETDATVRAHTTAE LLLERYGVVTRGVVVGEGVPGGFATMYKVLSRFEETGRCRRGYFVDSLGGAQFSTPSVVD RLRSFSDSIEGRHSETAAVTLAACDPANPYGAALPWPKSSADDDAPRHRPGRKAGGLVVL VDGALVLFVERGGRTLLTFDDDPGRLRSACASLAATVKRGGVDKIVVEKVDGESIHGHEF AGYLAEAGFSATPRGYRLRF NT seq 4563 nt NT seq  +upstreamnt  +downstreamnt atggtgaccgacatcctcgatcgtttctccgcgccgacccgggcgtggttcgccggggca ttcgagtccccgaccccggcccagctcggcgcgtgggattcgatctcctcgggagcccac acgctcgtcgtcgcccccaccggctcgggcaagaccctgtcggcgttcctgtggtcgctc gaccggctctcgtccaccccggccgacgagcacgccgcgcgtgagcaccgcacccgcgtc ctgtacgtctcgccgctcaaggccctcgccgtcgacgtcgagcgcaatctgcgctccccg ctcgtcggcatcacgcagaccgcgaaacgtctcggcctgacgccacccgacatcaccgtc ggtgtgcgttccggcgacacctcccaggccgatcgtcgcgccctggcgcgcacgccaccg gacatcctcatcacgacgcccgagtcgctattcctcatgctcacctcgtccgcgcgggag aacctcgtcggtgtcgagacggtgatcgtcgacgaggtccacgcggtggcggggacgaaa cgcggggcgcatctcgcgctgtcgctcgagcgtctcgaccagctcctgcgcgcgccggcc caacgcatcgggttgtcggccaccgtgcggccgcacgaggaggtcggccggttcctcgcc ggttccgcccccatccggatcgtcgcgccgccctcggcgaagacgtgggatctcacggtg cgcgtaccggtcgaggacatgaccgaactcggggtctccgaacccgacgaggaatcgttc tccccatcaccgcaggccgggtcgatctggccgcacgtcgaggaacagatcgtcgacctc atcaccgaacaccggtcgacgatcgtgttcgccaattcccggcgactgtccgaacgtctc accgcccggctcaacgagatccacgccgaacgcctcggcgaggaggtggaccgcgagggc gcaccgccttcacagctcgggtcgcccaccgagaccaccgccggcgctgcccccgtgctc gcccgcgcccaccacgggtcggtgagcaaggaccagcgcgccctgatcgaggacgacctc aagtcgggccggttgcggtgcgtggtggcgacgtcgagtctcgaactcggcatcgacatg ggtgcggtcgatctcgtgatccaggtcgaggctccgccctcggtggccagcggtctgcaa cgcgtcggccgcgccgggcaccaggtgggcgagacctcgcgcggcgtgctgttccccaag caccgcaccgatctcgtgcactgcgcggtgaccgtcgagcggatggtcgagggacacatc gaggcgctgcaggtcccggcgaacccgctggacgtgctcgcccagcagacggtcgcggcc acggccctcgaacccatcgacgtcgacgactggttcgacacggtgcggcgcagcggatcg ttcgcgacgctctcccgcggtgtctacgaatccgtcctcgacctgctcgccggtcgctat ccgtccgacgagttcgccgaactccgcccccgggtggtgtgggaccgcacggccggcaca ctcaccggccggcccggcgcccaacggctcgccgtcacctccggcggcacgatccccgac cgcggcctgttcaccgtgtacatggtcggcgagaagaacacgcgggtgggcgaactcgac gaagagatggtctacgagtcgcgggtgggcgacgtcttcgcactcggtgccaccagctgg cggatcgaggagatcacattcgaccgggtcctggtctcccccgcctacggccggcccggc cggttgcccttctggcacggcgacagtcagggtcgccccgccgaactcggtgccgcgctc ggcgcattcctgcgcgagatggggcacgcctcaccggaggacgccgagacccgctgccgc aagggcggtctcgacgactacgcgaccggaaacctcatccgcctgctcgacgagcaacgc accgccaccgggcacctgcccaccgaccgcacgctcgtcgtcgaacggttccgcgacgaa ctcggcgactggcggctggtgctgcactcgccgttcgggttgcgggtgcacgcaccgtgg gcgctcgcggtgggcgcgcgactgctcgaacgctacggcgtcgaatcccatcccaccccg tccgacgacggcatcatcgtccggctgcccgacaccgacgacgccccacccggttcggag atcttcgtcttcgacaccgaggagatcgacgacatcgtcaccgaacaggtcggcggctcg gcgttgttcgcgtcccgcttccgggaatgcgcggcgcgggccctgctcctgccccgccgc aacccgggcaagcgcgccccgctgtggcagcagcgccagcgatcggcgcaactgctcgac gtcgctcgccgctatcccgacttccccatcctgctcgagacggtgcgcgagtgcctgcag gacgtctacgacctgcccgctctgcgcgacctgctcggcagcatcgcccagcgcaagatc cggctggtggaggtcgagacccccacggcttctccgttcgcgacgtcgctgctgttctcc tatgtgggtgagttcctgtacgagggcgacagcccgctcgccgaacggcgggccgcggca ctgtcgctcgactcgacgctgctcgccgaactcctcggccgggtcgagctgcgcgaactg ctcgacgccgacgtcatcaccgaggccgagcacgaactgcaacgactgaccccgcagcga cgcgcacgagacgccgagggcgtcgccgatctgctgcgtctgctcggtccgctcaccgac gccgaactgcgcgagcgcaccaccgacgacccgacgccgtggatcgaggatctcgaaacg caacgacgggcgctgcgtgtctcgtacgcgggcgagcaccggtgggcggcgatcgaggac gcctcacgtctgcgcgacgcgctgggcgtgcccctgcccatcggggttccgacggtgttc gtcgaaccggtccccgacccgctcggcgatctgatcgcccggcacgcccgcacccacggc ccgttcaccaccgcgcaggccgccgcccggttcggactgggcacggcggtcgtcgaatcc gtcctcgagcgactcgcctccgagaagcgcgtcacggcaggcgaattccgccccggtgcg agcggatcggaatggtgcgacacggaggtgctccgaaggctgcggcgccggtcgctcgcc gccgcccggcaggacgtcgaacccgtcagcaccacgaccctcggacgattcctgcccgac tggcaccacctcggcaccggcccgggcacgagcgcgctctacggcatcgacggtgtcctc accgtcgtcgaacaactggccggggtaccggtgcccgcgagcgccctcgaaccgctgatc ctcgctccacgtgtccgcgactacacgccgacgatgctcgacgaactcaccacgaccggc gaggtcctgtggtcgggtgccggatccatctccgggaaggacggttgggtggcgctgcac ccggccgatctggctccggtgagcctggctccggtcgacgacatcgaactcgggccggtg caccaggcgatcctcgagtcgctctcgggcggcggggcgttcttcttccggcaactcgtc gacgccgtcaccaccctccacacgacggcgagcgacacgacggtcgccgatgcgctgtgg gagctggtgtggagcgggcacgtcgcgggcgacaccctcgccccgctgcgcgccctgatc ggcgacacctcccgcgccaagcctgcccaccgcaccccgcgccgggcgccgcgtgcccgg atgtaccgcgcccggcccaccctgccgagccgcaccgggccaccgaccgtcagcgggcgc tggtcgatgctgcccgagcgcgagaccgacgcgacggtccgcgcgcacaccaccgccgaa ctgctgctcgagcggtacggcgtggtcacccgcggtgtcgtcgtcggcgaaggtgtgccc ggcggtttcgcgacgatgtacaaggtgctcagccggttcgaggagaccggccggtgccgg cggggctatttcgtcgattcgctgggcggagcgcagttctcgacaccgtcggtcgtcgac cgcctgcggtcgttctcggattcgatcgagggtcggcactcggagaccgcggccgtcacc ctcgcggcgtgcgatcccgccaacccgtacggtgcggcgctgccgtggccgaaatcgtcg gccgacgacgacgcgccgcggcaccggccgggccgcaaggccggtggtctcgtggtgctc gtcgacggggcgctcgtactgttcgtcgaacgcggcggacgcacattgctcaccttcgac gacgatccgggccggttgcgcagcgcatgcgcgtcgctcgcagcgaccgtcaaacgcgga ggtgtcgacaagatcgtcgtcgagaaggtcgacggtgagtcgatccacgggcacgagttc gccggataccttgccgaagcgggattctcggcgacaccgcgcggctaccggttgaggttc tga

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