Rhodococcus sp. PD04: U9J23_16775
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Entry
U9J23_16775 CDS
T11027
Name
(GenBank) NADP-dependent isocitrate dehydrogenase
KO
K00031
isocitrate dehydrogenase [EC:
1.1.1.42
]
Organism
rhpd Rhodococcus sp. PD04
Pathway
rhpd00020
Citrate cycle (TCA cycle)
rhpd00480
Glutathione metabolism
rhpd00720
Other carbon fixation pathways
rhpd01100
Metabolic pathways
rhpd01110
Biosynthesis of secondary metabolites
rhpd01120
Microbial metabolism in diverse environments
rhpd01200
Carbon metabolism
rhpd01210
2-Oxocarboxylic acid metabolism
rhpd01230
Biosynthesis of amino acids
rhpd04146
Peroxisome
Module
rhpd_M00009
Citrate cycle (TCA cycle, Krebs cycle)
rhpd_M00010
Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate
Brite
KEGG Orthology (KO) [BR:
rhpd00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
U9J23_16775
09102 Energy metabolism
00720 Other carbon fixation pathways
U9J23_16775
09106 Metabolism of other amino acids
00480 Glutathione metabolism
U9J23_16775
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
U9J23_16775
Enzymes [BR:
rhpd01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.42 isocitrate dehydrogenase (NADP+)
U9J23_16775
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GFIT
Motif
Pfam:
Iso_dh
Motif
Other DBs
NCBI-ProteinID:
WSE21331
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Position
complement(3627501..3628718)
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AA seq
405 aa
AA seq
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MSKIKVEGKVVELDGDEMTRIIWQFIKDKLIHPYLDVDLEYYDLGVENRDATDDQVTVDA
ANAIKKYNVGVKCATITPDEARVEEFGLKKMWRSPNGTIRNILGGTIFRAPIIISNVPRL
VPGWTKPVIVGRHAFGDQYRATDFKVDRPGTVTITFTPEDGSEPIQHEVCRIPEDGGVVM
GMYNYKKSIQDFARASLSYGLQRNYPVYLSTKNTILKAYDGMFKDEFQRIYEEEFKAEFD
AAGLTYEHRLIDDMVASSLKWEGGYVWACKNYDGDVQSDTVAQGYGSLGLMTSVLMTPDG
KTVEAEAAHGTVTRHYRQHQQGKPTSTNPIASIFAWTRGLEHRGKLDNTPEVIEFAQQLE
DVVIKTVEAGQMTKDLALLVGPEQSWLTTEEFLGALDENLQKARA
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atgtccaagatcaaggttgagggtaaggtcgtcgaactcgacggcgacgagatgacccgc
atcatctggcagttcatcaaagacaagctgatccacccgtacctggacgtggatctcgag
tactacgacctcggcgtggagaaccgcgacgccaccgacgatcaggtgacggtcgacgcg
gcgaacgccatcaagaagtacaacgtcggcgtcaagtgcgccaccatcacccccgacgaa
gcgcgcgtcgaggagttcggtctgaagaagatgtggcggtcgcccaacggcaccatccgt
aacatcctcggcggcaccatcttccgcgcccccatcatcatctcgaacgtgccgcgcctg
gtgccgggctggaccaagcccgtcatcgtcggccgccacgcgttcggcgaccagtaccgc
gccaccgacttcaaggtcgaccgcccgggcaccgtcaccatcaccttcacgcccgaggac
ggcagcgagccgatccagcacgaggtctgccggatccccgaggacggcggcgtcgtgatg
ggtatgtacaactacaagaagtccatccaggacttcgcgcgcgcctcgctctcgtacggc
ctgcagcgcaactacccggtctacctgtcgaccaagaacacgatcctgaaggcctacgac
ggcatgttcaaggacgagttccagcggatctacgaggaagagttcaaggcggagttcgac
gccgccggtctcacctacgagcaccgcctcatcgacgacatggtcgcatcgtccctcaag
tgggagggcggctacgtctgggcctgcaagaactacgacggcgacgtccagtccgacacc
gtcgcgcagggctacggctcgctgggcctgatgacctccgtcctgatgaccccggacggc
aagaccgtcgaggcggaggccgcacacggcaccgtcacccggcactaccgtcagcaccag
cagggcaagccgacgtcgaccaacccgatcgcgtcgatcttcgcctggacccgtggcctc
gagcaccgcggcaagctcgacaacacccccgaggtcatcgagttcgcgcagcagctcgag
gacgtcgtcatcaagaccgtcgaagccggtcagatgaccaaggacctcgcactgctcgtc
ggccccgagcagagctggctgaccaccgaggagttcctcggcgcactcgacgagaatctg
cagaaggctcgcgcctga
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