Rhodococcus sp. PD04: U9J23_18220
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Entry
U9J23_18220 CDS
T11027
Symbol
deoC
Name
(GenBank) deoxyribose-phosphate aldolase
KO
K01619
deoxyribose-phosphate aldolase [EC:
4.1.2.4
]
Organism
rhpd Rhodococcus sp. PD04
Pathway
rhpd00030
Pentose phosphate pathway
rhpd01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rhpd00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00030 Pentose phosphate pathway
U9J23_18220 (deoC)
Enzymes [BR:
rhpd01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.2 Aldehyde-lyases
4.1.2.4 deoxyribose-phosphate aldolase
U9J23_18220 (deoC)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DeoC
DHO_dh
Radical_SAM
Motif
Other DBs
NCBI-ProteinID:
WSE21600
LinkDB
All DBs
Position
complement(3983745..3984410)
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AA seq
221 aa
AA seq
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MSGTPLTRTQVASMIDHTLLKPEASSQDVRALVDEAVELGVYAVCVSPSMLPLRAEGVTV
ATVVGFPSGKHHSLIKGAEARLAVDEGAREIDMVIDVGAAVAGDYNAVLADILTVREAIG
FDPVLKVIIESAVLSDEAIVEVCRAAEKAGANFVKTSTGFHPAGGATTHAVALMAETVGG
RLGIKASGGIRTAEDAIAMIDAGATRLGLSGSRAVLDGLQN
NT seq
666 nt
NT seq
+upstream
nt +downstream
nt
atgtccggaaccccgttgacccgcacgcaggtcgcgtcgatgatcgaccacaccctcctc
aaacccgaagcgtcctcacaggacgtgcgggccctcgtcgacgaagccgtcgagctcggc
gtgtatgcggtgtgcgtgtcgccgtcgatgctgcccctgcgggccgagggggtcacggtc
gcgacggtcgtcggtttcccgtcgggcaagcaccattcgctcatcaagggcgccgaggcg
cgacttgccgtcgacgagggtgcacgcgagatcgacatggtgatcgacgtgggggcagcg
gtggccggcgactacaacgccgtcctcgccgacatcctcaccgtgcgcgaagcgatcggg
ttcgacccggtcctcaaggtcatcatcgaatccgccgtgctctccgacgaggcgatcgtc
gaggtgtgccgcgccgcggagaaggccggggcgaacttcgtgaagacctccaccggcttc
catcccgcgggcggcgccaccacccacgcggtcgcgctcatggcggagacggtgggcggc
cggctcggcatcaaggcgagcggcggaatccgcaccgccgaggacgcgatcgcgatgatc
gacgccggagccacgcgcctcggactgtccggcagccgcgcagtcctcgacggtctgcag
aactga
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