Rhodococcus sp. PD04: U9J23_18650
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Entry
U9J23_18650 CDS
T11027
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
rhpd Rhodococcus sp. PD04
Pathway
rhpd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rhpd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
U9J23_18650 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rhpd03019
]
U9J23_18650 (groL)
03110 Chaperones and folding catalysts [BR:
rhpd03110
]
U9J23_18650 (groL)
03029 Mitochondrial biogenesis [BR:
rhpd03029
]
U9J23_18650 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rhpd04147
]
U9J23_18650 (groL)
Enzymes [BR:
rhpd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
U9J23_18650 (groL)
Messenger RNA biogenesis [BR:
rhpd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
U9J23_18650 (groL)
Chaperones and folding catalysts [BR:
rhpd03110
]
Heat shock proteins
HSP60 / Chaperonin
U9J23_18650 (groL)
Mitochondrial biogenesis [BR:
rhpd03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
U9J23_18650 (groL)
Exosome [BR:
rhpd04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
U9J23_18650 (groL)
Exosomal proteins of other body fluids (saliva and urine)
U9J23_18650 (groL)
Exosomal proteins of breast cancer cells
U9J23_18650 (groL)
Exosomal proteins of colorectal cancer cells
U9J23_18650 (groL)
Exosomal proteins of bladder cancer cells
U9J23_18650 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
WSE21680
LinkDB
All DBs
Position
complement(4067762..4069387)
Genome browser
AA seq
541 aa
AA seq
DB search
MAKIIAFDEEARRGLERGLNSLADAVKVTLGPKGRNVVLEKKWGAPTITNDGVSIAKEIE
LEDPYEKIGAELVKEVAKKTDDVAGDGTTTATVLAQALVREGLRNVAAGANPLGLKRGIE
KAVEAVTAKLLDTAKEVETKEQIAATAGISAGDPAIGELIAEAIDKVGKEGVITVEESNT
FGLQLELTEGMRFDKGYISLYFATDAERQEAVLEDPYILLVSSKISTVKDLLPLLEKVIQ
SGKPLLIIAEDVEGEALSTLVLNKIRGTFKSVAVKAPGFGDRRKAQLADIAILTGGEVVS
EEVGLSLETAGIELLGQARKVVVTKDETTIVEGAGDPDAIAGRVNQIRAEIEASDSDYDR
EKLQERLAKLAGGVAVIKAGAATEVELKERKHRIEDAVRNAKAAVEEGIVAGGGVALLQA
APVLDDLKLEGDEATGANIVKVALEAPLKQIAFNAGLEPGVVAEKVRNLEAGHGLNAATG
DYEDLLEAGINDPVKVTRSALQNAASIAALFLTTEAVVADKPEKAAAPAGDPTGGMGGMD
F
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atggccaagatcatcgcgttcgacgaagaggcccgtcgcggcctcgagcggggcctcaac
agcctcgccgacgcagtcaaagtgacgttgggccccaagggtcgcaacgtcgttctcgag
aagaagtggggcgcccccacgatcaccaacgatggtgtctccatcgccaaggagatcgag
ctcgaggatccgtacgagaagatcggcgccgagctggtcaaggaagttgccaagaagacc
gacgacgtcgcgggtgacggcaccaccaccgctaccgtgctcgcccaggctctcgtccgc
gagggtctgcgcaacgttgctgcgggcgccaaccccctcggcctgaagcgcggcatcgag
aaggccgtcgaggccgtcaccgccaagctgctcgacaccgccaaggaggtcgagaccaag
gagcagatcgccgccaccgcaggcatctccgccggcgaccccgcgatcggtgagctcatc
gccgaggccatcgacaaggtgggcaaggaaggcgtcatcaccgtcgaggagtccaacacc
ttcggtctccagctcgagctgaccgagggtatgcgcttcgacaagggctacatctccctc
tacttcgccaccgacgcagagcgtcaggaggcagtgctcgaggatccctacatcctgctc
gtcagctccaagatctccacggtcaaggacctgctgccgctgctcgagaaggtcatccag
tcgggcaagccgctgctgatcatcgccgaggacgtcgagggtgaggccctgtccaccctg
gtcctcaacaagatccgcggcaccttcaagtcggtcgccgtcaaggctccgggcttcggc
gaccgccgcaaggcccagctcgccgacatcgccatcctcaccggtggcgaggtcgtcagc
gaagaggtcggcctctccctcgagaccgccggcatcgagctgctcggccaggcccgcaag
gtcgtcgtcaccaaggacgagaccaccatcgtcgagggcgcgggcgatcccgacgccatc
gccggtcgcgtcaaccagatccgcgccgagatcgaggcgtcggattcggactacgaccgc
gagaagctgcaggagcgcctcgcgaagctggccggcggcgtcgccgtcatcaaggccggt
gccgcgaccgaggtcgagctcaaggagcgcaagcaccgcatcgaggacgccgtccgcaac
gcgaaggctgccgtcgaagagggcatcgtcgccggtggtggcgtggccctgctgcaggcc
gctccggttctcgacgacctcaagctcgagggcgacgaggccacgggtgccaacatcgtc
aaggtcgccctcgaggcgccgctgaagcagatcgccttcaacgccggcctcgagcccggc
gtcgtcgccgagaaggtccgcaacctcgaggccggccacggcctcaacgctgcgaccggc
gactacgaggacctgctcgaagcgggcatcaacgacccggtcaaggtcacccgctcggcg
ctgcagaacgctgcgtcgatcgcggctctgttcctgacgaccgaggccgtcgtcgccgac
aagccggagaaggccgccgctcccgcgggcgacccgaccggcggcatgggcggcatggac
ttctga
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