Rhodococcus sp. PD04: U9J23_24895
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Entry
U9J23_24895 CDS
T11027
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
rhpd Rhodococcus sp. PD04
Pathway
rhpd00010
Glycolysis / Gluconeogenesis
rhpd00020
Citrate cycle (TCA cycle)
rhpd00260
Glycine, serine and threonine metabolism
rhpd00280
Valine, leucine and isoleucine degradation
rhpd00310
Lysine degradation
rhpd00380
Tryptophan metabolism
rhpd00620
Pyruvate metabolism
rhpd00630
Glyoxylate and dicarboxylate metabolism
rhpd00640
Propanoate metabolism
rhpd00670
One carbon pool by folate
rhpd00785
Lipoic acid metabolism
rhpd01100
Metabolic pathways
rhpd01110
Biosynthesis of secondary metabolites
rhpd01120
Microbial metabolism in diverse environments
rhpd01200
Carbon metabolism
rhpd01210
2-Oxocarboxylic acid metabolism
rhpd01240
Biosynthesis of cofactors
Module
rhpd_M00009
Citrate cycle (TCA cycle, Krebs cycle)
rhpd_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
rhpd_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
rhpd_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
rhpd00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
U9J23_24895 (lpdA)
00020 Citrate cycle (TCA cycle)
U9J23_24895 (lpdA)
00620 Pyruvate metabolism
U9J23_24895 (lpdA)
00630 Glyoxylate and dicarboxylate metabolism
U9J23_24895 (lpdA)
00640 Propanoate metabolism
U9J23_24895 (lpdA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
U9J23_24895 (lpdA)
00280 Valine, leucine and isoleucine degradation
U9J23_24895 (lpdA)
00310 Lysine degradation
U9J23_24895 (lpdA)
00380 Tryptophan metabolism
U9J23_24895 (lpdA)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
U9J23_24895 (lpdA)
00670 One carbon pool by folate
U9J23_24895 (lpdA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rhpd04147
]
U9J23_24895 (lpdA)
Enzymes [BR:
rhpd01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
U9J23_24895 (lpdA)
Exosome [BR:
rhpd04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
U9J23_24895 (lpdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Pyr_redox
Pyr_redox_3
FAD_binding_2
NAD_binding_8
DAO
FAD_oxidored
GIDA
HI0933_like
FAD_binding_3
Lys_Orn_oxgnase
AlaDh_PNT_C
3HCDH_N
Thi4
XdhC_C
Amino_oxidase
ANAPC4_WD40
Motif
Other DBs
NCBI-ProteinID:
WSE25357
LinkDB
All DBs
Position
unnamed1:105792..107192
Genome browser
AA seq
466 aa
AA seq
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MTEKYDVLVVGSGPGGYVAAIRAAQHGLRTAIVERDRLGGICLNWGCIPTKALLHGADVA
HTLVNLQPLGFSTGSVEFDMGRLVEFSRSVSGRLSDGIGYLMKKNDIDVVEGAARLLDKG
VVAVTTADETVSEYRADHVILATGARPRPVPGVIPDGDRIWTYFDALVPTDLPKSLLVIG
SGAVGVEFASLYKDLGTDVTLVEMAPQIMPVEDFAVASHVRRQFEQRGIKIHTGASVSEL
AAGPDTVTVTVQSTAGTVDELTVDRVLVAAGIQGNVEDLGLTELGIEVEHGFITTDQWCR
TSAFGVYAIGDVAGAPCLAHKASHEAVLCVDKLAGVQHVRPLDRDYVPGCTYARPQVASL
GLTEEQARATGRRLQVGQFDLQASGKALAIGEADGFVKTIFDADSGELLGAHMVGPDVTE
QIQGFGIARALEATADDLAEVVFAHPTLSEAMHESVLSALGRPINM
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atgacagagaaatacgacgtcctcgtcgtcggcagcggaccgggtggttatgttgcggcc
atccgcgccgcgcagcacggtttgcgcaccgcgatcgtcgaacgggaccggctcggaggg
atctgcctgaactggggatgcattcccaccaaggccttgctgcacggcgccgatgtcgcc
cacacgttggtgaatctccagcccctcgggttcagcaccggtagtgtggaattcgatatg
ggacgcctcgtcgagttcagcaggtcggtgtccggacgactgtccgacggtatcgggtac
ctgatgaagaagaacgacatcgatgtcgtcgaaggagcggcgcgattgctcgacaagggc
gtcgtcgcagtgacgacagcagacgagacggtgtccgaataccgggccgaccacgtgatc
ctggcaaccggagcccggccgcgtccggttcccggcgtcattcccgacggcgaccgcatc
tggacatacttcgacgctctcgtcccgacggatctgccgaaatcattgttggtcatcggc
tctggcgcagtcggcgttgaattcgcgagcttgtacaaggatctcggcaccgacgtcacc
ctcgtagagatggcgccgcagatcatgccggtggaggacttcgctgtcgcaagccacgta
cggcgtcagttcgagcaacgaggtatcaagattcacaccggcgcctcggtatccgaactg
gcagccggcccggatactgtcaccgttaccgtgcagtcgaccgccggaaccgtcgatgaa
ctcactgtggacagggtgctcgtcgcagccggcatccagggcaacgtcgaggatctcggc
ctcacagaacttggcatcgaggtcgaacacggtttcatcaccaccgatcagtggtgtcgc
accagcgcattcggggtatacgcgatcggcgacgtggcaggcgcaccttgcctcgcccac
aaggccagccacgaggccgtgctgtgcgtggacaagcttgcaggtgtgcagcacgtccgg
ccgttggaccgggactacgttccgggctgtacgtacgcgaggccgcaggtcgccagcctc
ggtctcaccgaagagcaagcgcgggcgaccgggcgtcgcctgcaagtcgggcaattcgat
ctgcaagcatccggaaaggcactcgctatcggtgaagccgacggcttcgtgaaaacgatc
ttcgacgccgacagcggtgaacttctcggtgcccatatggtcggcccggacgtcaccgag
cagattcagggcttcggtatcgcccgagccctggaggcgactgccgacgatctcgccgaa
gtcgtcttcgcacacccgacactgtctgaagcaatgcacgaatcggtcctgtccgcgcta
ggccgtccgatcaacatgtag
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