KEGG   Rhodococcus sp. PD04: U9J23_24895
Entry
U9J23_24895       CDS       T11027                                 
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
rhpd  Rhodococcus sp. PD04
Pathway
rhpd00010  Glycolysis / Gluconeogenesis
rhpd00020  Citrate cycle (TCA cycle)
rhpd00260  Glycine, serine and threonine metabolism
rhpd00280  Valine, leucine and isoleucine degradation
rhpd00310  Lysine degradation
rhpd00380  Tryptophan metabolism
rhpd00620  Pyruvate metabolism
rhpd00630  Glyoxylate and dicarboxylate metabolism
rhpd00640  Propanoate metabolism
rhpd00670  One carbon pool by folate
rhpd00785  Lipoic acid metabolism
rhpd01100  Metabolic pathways
rhpd01110  Biosynthesis of secondary metabolites
rhpd01120  Microbial metabolism in diverse environments
rhpd01200  Carbon metabolism
rhpd01210  2-Oxocarboxylic acid metabolism
rhpd01240  Biosynthesis of cofactors
Module
rhpd_M00009  Citrate cycle (TCA cycle, Krebs cycle)
rhpd_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
rhpd_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
rhpd_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:rhpd00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    U9J23_24895 (lpdA)
   00020 Citrate cycle (TCA cycle)
    U9J23_24895 (lpdA)
   00620 Pyruvate metabolism
    U9J23_24895 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    U9J23_24895 (lpdA)
   00640 Propanoate metabolism
    U9J23_24895 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    U9J23_24895 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    U9J23_24895 (lpdA)
   00310 Lysine degradation
    U9J23_24895 (lpdA)
   00380 Tryptophan metabolism
    U9J23_24895 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    U9J23_24895 (lpdA)
   00670 One carbon pool by folate
    U9J23_24895 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:rhpd04147]
    U9J23_24895 (lpdA)
Enzymes [BR:rhpd01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     U9J23_24895 (lpdA)
Exosome [BR:rhpd04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   U9J23_24895 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox Pyr_redox_3 FAD_binding_2 NAD_binding_8 DAO FAD_oxidored GIDA HI0933_like FAD_binding_3 Lys_Orn_oxgnase AlaDh_PNT_C 3HCDH_N Thi4 XdhC_C Amino_oxidase ANAPC4_WD40
Other DBs
NCBI-ProteinID: WSE25357
LinkDB
Position
unnamed1:105792..107192
AA seq 466 aa
MTEKYDVLVVGSGPGGYVAAIRAAQHGLRTAIVERDRLGGICLNWGCIPTKALLHGADVA
HTLVNLQPLGFSTGSVEFDMGRLVEFSRSVSGRLSDGIGYLMKKNDIDVVEGAARLLDKG
VVAVTTADETVSEYRADHVILATGARPRPVPGVIPDGDRIWTYFDALVPTDLPKSLLVIG
SGAVGVEFASLYKDLGTDVTLVEMAPQIMPVEDFAVASHVRRQFEQRGIKIHTGASVSEL
AAGPDTVTVTVQSTAGTVDELTVDRVLVAAGIQGNVEDLGLTELGIEVEHGFITTDQWCR
TSAFGVYAIGDVAGAPCLAHKASHEAVLCVDKLAGVQHVRPLDRDYVPGCTYARPQVASL
GLTEEQARATGRRLQVGQFDLQASGKALAIGEADGFVKTIFDADSGELLGAHMVGPDVTE
QIQGFGIARALEATADDLAEVVFAHPTLSEAMHESVLSALGRPINM
NT seq 1401 nt   +upstreamnt  +downstreamnt
atgacagagaaatacgacgtcctcgtcgtcggcagcggaccgggtggttatgttgcggcc
atccgcgccgcgcagcacggtttgcgcaccgcgatcgtcgaacgggaccggctcggaggg
atctgcctgaactggggatgcattcccaccaaggccttgctgcacggcgccgatgtcgcc
cacacgttggtgaatctccagcccctcgggttcagcaccggtagtgtggaattcgatatg
ggacgcctcgtcgagttcagcaggtcggtgtccggacgactgtccgacggtatcgggtac
ctgatgaagaagaacgacatcgatgtcgtcgaaggagcggcgcgattgctcgacaagggc
gtcgtcgcagtgacgacagcagacgagacggtgtccgaataccgggccgaccacgtgatc
ctggcaaccggagcccggccgcgtccggttcccggcgtcattcccgacggcgaccgcatc
tggacatacttcgacgctctcgtcccgacggatctgccgaaatcattgttggtcatcggc
tctggcgcagtcggcgttgaattcgcgagcttgtacaaggatctcggcaccgacgtcacc
ctcgtagagatggcgccgcagatcatgccggtggaggacttcgctgtcgcaagccacgta
cggcgtcagttcgagcaacgaggtatcaagattcacaccggcgcctcggtatccgaactg
gcagccggcccggatactgtcaccgttaccgtgcagtcgaccgccggaaccgtcgatgaa
ctcactgtggacagggtgctcgtcgcagccggcatccagggcaacgtcgaggatctcggc
ctcacagaacttggcatcgaggtcgaacacggtttcatcaccaccgatcagtggtgtcgc
accagcgcattcggggtatacgcgatcggcgacgtggcaggcgcaccttgcctcgcccac
aaggccagccacgaggccgtgctgtgcgtggacaagcttgcaggtgtgcagcacgtccgg
ccgttggaccgggactacgttccgggctgtacgtacgcgaggccgcaggtcgccagcctc
ggtctcaccgaagagcaagcgcgggcgaccgggcgtcgcctgcaagtcgggcaattcgat
ctgcaagcatccggaaaggcactcgctatcggtgaagccgacggcttcgtgaaaacgatc
ttcgacgccgacagcggtgaacttctcggtgcccatatggtcggcccggacgtcaccgag
cagattcagggcttcggtatcgcccgagccctggaggcgactgccgacgatctcgccgaa
gtcgtcttcgcacacccgacactgtctgaagcaatgcacgaatcggtcctgtccgcgcta
ggccgtccgatcaacatgtag

DBGET integrated database retrieval system