Rhodococcus sp. PAMC28705: E5769_10190
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Entry
E5769_10190 CDS
T11376
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
rhpm Rhodococcus sp. PAMC28705
Pathway
rhpm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rhpm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
E5769_10190 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rhpm03019
]
E5769_10190 (groL)
03110 Chaperones and folding catalysts [BR:
rhpm03110
]
E5769_10190 (groL)
03029 Mitochondrial biogenesis [BR:
rhpm03029
]
E5769_10190 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rhpm04147
]
E5769_10190 (groL)
Enzymes [BR:
rhpm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
E5769_10190 (groL)
Messenger RNA biogenesis [BR:
rhpm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
E5769_10190 (groL)
Chaperones and folding catalysts [BR:
rhpm03110
]
Heat shock proteins
HSP60 / Chaperonin
E5769_10190 (groL)
Mitochondrial biogenesis [BR:
rhpm03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
E5769_10190 (groL)
Exosome [BR:
rhpm04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
E5769_10190 (groL)
Exosomal proteins of other body fluids (saliva and urine)
E5769_10190 (groL)
Exosomal proteins of breast cancer cells
E5769_10190 (groL)
Exosomal proteins of colorectal cancer cells
E5769_10190 (groL)
Exosomal proteins of bladder cancer cells
E5769_10190 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
QCB50567
LinkDB
All DBs
Position
2226500..2228113
Genome browser
AA seq
537 aa
AA seq
DB search
MAKQIRFNEEARRALERGVDKLADAVKVTLGPRGRHVVLAKAFGGPTVTNDGVSIAREID
LEDPFENLGAQLVKSVATKTNDVAGDGTTTATVLAQALVRGGLKNIAAGANPIALGSGIA
KAADKVAEALRAAATPVEGKEAIAQVATVSSRDPEIGELVGEALTRVGSDGVVTVEESST
LSTELVVTEGVQFDKGYLSPYFVTDLDAQQAVLEDAYILLFREKITSLPDFLPLLEKVAE
SGKPLLIIAEDIEGEVLSTLVVNSIRKTIKAVAVKAPFFGDRRKAFLDDLAVVTAAQVIT
ADVGLSLKEAGLELLGQARRVVVTKDDTTIVDGAGTQVDIDARVGQLRREIENTDSDWDR
EKLEERLAKLSGGIAVIKVGAATETELKERKFRVDDAVNAAKAAVEEGIVPGGGSALTQA
ALSLVDDLGLTGDEATGVAVMRTALNAPLFWIAANAGVDGSVVVSKVAELPKGHGFNAAT
LTYGDLLADGVVDPVKVTRSAVVNAASVARMILTTESAIVEKPVDYEEPAGGHGHNH
NT seq
1614 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagcaaatccgattcaacgaggaagctcgccgcgccctcgagcgtggagtcgac
aaactcgccgacgcggtcaaggtgacgctcggaccccgtggacggcacgttgtgctggcc
aaggctttcggtggcccaacggtcaccaatgacggcgtctcgatcgcccgtgagatcgac
ctcgaagacccgttcgagaacctgggtgcccagctcgtcaagagcgtcgcgaccaagacc
aacgacgtcgcaggcgacggaaccacgacagcaaccgtgcttgcgcaggcactcgttcgc
ggtggactcaagaacatcgccgccggcgcgaacccgatcgcactcggatcgggaatcgcc
aaggccgccgacaaggttgccgaagcgctccgcgctgccgcaactcccgtcgagggcaaa
gaggccatcgcccaggtcgcaacagtgtcctcacgcgaccctgagatcggcgaactggtc
ggcgaggcactcacccgtgtcggctccgacggcgtggtgacggtggaagagtcctcgact
ctgagcaccgaactcgtggtcaccgaaggggtgcagttcgacaagggatacctgtcgccg
tacttcgtgaccgacctcgacgcacagcaggctgttctcgaggacgcatacattctgctc
ttccgcgagaagatcacctcccttcccgacttccttccgctgttggagaaggtcgccgag
agtggcaagccactactgatcatcgccgaggacatcgagggcgaagttctctcgacactc
gtggtgaactccatccgcaagaccatcaaggccgtagccgtcaaggcaccgttcttcggt
gatcgtcgcaaggcgttcctcgacgacctggcagtggtgacggcagcgcaggtcatcaca
gctgacgtcggcctcagcctcaaggaagcaggactcgagcttctcggtcaggcgcgtcgc
gtcgtcgtcaccaaagacgacaccacgatcgtcgacggagcaggcacgcaggtcgacatc
gatgcacgtgtcggacagttgcgacgcgagatcgagaacaccgactcggactgggatcgg
gagaagctcgaagagcgcctcgcgaagctctccggtggcatcgcggtcatcaaggtgggc
gcagcgaccgagaccgagctcaaggaacgcaagttccgcgtcgacgacgcggtcaatgcg
gccaaggctgcggtcgaagaaggcatcgttcccggtggagggtcggcactgacgcaggct
gcgctttcgctcgtggacgatctcgggctgacgggcgacgaggctaccggtgttgcagtc
atgcgtacggctctgaatgccccgctgttctggatcgcagccaacgctggtgtcgacggt
tccgtcgtggtcagcaaggttgccgagctccccaagggccacggtttcaacgccgcgacc
ctgacctacggagatctactcgccgacggcgtggtggatccggtcaaggtgacccgctcg
gccgtcgtcaatgcggcctcggtcgcacggatgattctgacgaccgaaagcgcgatcgtc
gagaagccggtcgactacgaggagcccgcaggcgggcacggacacaaccactga
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