Rhodococcus sp. PAMC28705: E5769_12215
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Entry
E5769_12215 CDS
T11376
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
rhpm Rhodococcus sp. PAMC28705
Pathway
rhpm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rhpm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
E5769_12215
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rhpm03019
]
E5769_12215
03016 Transfer RNA biogenesis [BR:
rhpm03016
]
E5769_12215
Enzymes [BR:
rhpm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
E5769_12215
Messenger RNA biogenesis [BR:
rhpm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
E5769_12215
Transfer RNA biogenesis [BR:
rhpm03016
]
Prokaryotic type
tRNA degradation factors
E5769_12215
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
S1
KH_1
RNase_PH_C
KH-I_KHDC4-BBP
KH_2
S1_RRP5
KH_PNO1_2nd
KH_KhpA-B
KH_NusA_1st
Motif
Other DBs
NCBI-ProteinID:
QCB50889
LinkDB
All DBs
Position
2660929..2663181
Genome browser
AA seq
750 aa
AA seq
DB search
MTETTTLDAEEGIFEATAIIDNGTFGKRTIRFETGRLAQQAAGAVAAYLDEDTMLLSATT
AGKHPREGFDFFPLTVDVEERMYAAGRIPGSFFRREGRPSTDAILTCRLIDRPLRPTFVD
GLRNEIQVVITVLSLNPADLYDVVAINAASASTQIAGLPFSGPIGGVRVALIGKQWVAFP
TNEQLEKAVFNMVVAGRIVSGSGADADVAIMMVEAEATENVIELIEGGATAPNEAVVAEG
IEASKPFIAALCTAQQELAANASKPTGDYPVFPPYQSDVFEAVESAAKIPLNEALTIAGK
AEREAKLDEIKAQILAQVSDKFEGREKEIGAAFRALTKKSVRQRILTDHFRIDGRGVTDI
RSLSAEVAIVPRTHGSALFERGETQILGITTLDMVKMAQQIDSLGPETSKRYMHHYNFPP
YSTGETGRVGSPKRREIGHGALAERAILPVLPSQAEFPYAIRQVSEALSSNGSTSMGSVC
AATLSLLNAGVPLRAPVAGIAMGLVSDEVDGETRYVALTDILGAEDAFGDMDFKVAGTKD
FVTALQLDTKLDGIPSKVLAGALSQAKDARTTILEVMAEAIDTPDEMSPFAPRVTAIKVP
VDKIGEVIGPKGKMINSITEQTGANISIEDDGTVYVGAADGPSAQAAIDMINAIANPQLP
KVGERFLGTVVKTTAFGAFVSLLPGRDGLVHISKLGSGKRINKVEDVVSVGSKLRVEIAD
IDNRGKISLVPVEDDNAAVAVDVPTESPAE
NT seq
2253 nt
NT seq
+upstream
nt +downstream
nt
atgactgaaaccacaacgttggatgccgaagaaggcatcttcgaagctaccgccatcatc
gacaacggaacgttcggcaagcgaacgattcgattcgagaccggtcggctcgcgcagcag
gcagcaggcgctgtcgcggcgtacctcgacgaagacacgatgttgctgtcggccaccacg
gcaggcaagcacccccgcgaaggattcgacttcttcccactgacggtcgatgtcgaagag
cgcatgtacgcagcaggacgcatccccggatcgttcttccgccgcgaaggtcgcccttcg
acggacgcgatcctgacctgccgcctcatcgaccgtccgctgcgtccgacgttcgtcgac
ggactccgcaacgagatccaggtcgtcatcacggtcctgagcctcaatcccgcggacctc
tacgacgttgtcgcgatcaacgctgcgtctgcgtccacacagatcgccggcctgccgttc
tccggcccgatcggtggcgtccgcgtcgctctgatcggcaagcagtgggttgcattcccc
accaacgagcagctcgagaaggccgtgttcaacatggtcgtcgccggccgtatcgtctcg
ggctcgggtgctgacgccgatgtcgcgatcatgatggtcgaggcagaagccaccgagaac
gtgatcgagctcatcgaaggtggcgccaccgcccccaacgaggcagtcgttgccgagggc
atcgaagcatccaagccgttcatcgctgctctgtgcaccgcacagcaggagctggcagcc
aatgcttccaagccgaccggcgactacccggtgttcccgccgtaccaatcggacgtcttc
gaggccgtcgagtccgctgcgaagattccgctgaacgaggcattgaccatcgccggcaag
gccgagcgtgaggccaagctcgacgaaatcaaggctcagatcctcgcgcaggtttccgac
aagttcgaaggccgcgagaaggaaatcggcgcagcgttccgcgctctcaccaaaaagtct
gtccgccagcggatcctgaccgatcacttccgtatcgacggccgcggtgtcaccgacatc
cgttcgttgtcggcagaggttgcgatcgttccgcgtacacacggcagcgcactgttcgag
cgcggcgagacccagatcctgggcatcacaacgctcgacatggtcaagatggcgcagcag
atcgactccctcgggcccgagaccagcaagcgttacatgcatcattacaacttcccgccg
tactcgaccggtgagacgggacgcgtcggttcgccgaagcgtcgcgaaatcggacacgga
gcgctcgccgagcgtgcaatcctgccggtgctccctagccaggcggagttcccctacgca
atccgtcaggtatccgaggcactgagctccaacggatcgacgtcgatgggctcggtatgt
gccgcgactctgtcgctgctcaacgccggtgtcccattgcgtgcaccggttgccggtatc
gccatgggtctcgtctccgacgaggtcgacggagagacccgctacgttgcgctcaccgac
atcctcggtgccgaagatgctttcggcgacatggacttcaaggtcgccggaaccaaggac
ttcgtcacggcgcttcagctcgatacgaagctcgacgggattccgtcgaaggtcctcgcc
ggcgcactgtcgcaggccaaggatgctcgtacgacgatcctcgaggtcatggcggaagcc
atcgacacccctgacgagatgagccccttcgcgcctcgtgtcacggcgatcaaggttccc
gtcgacaagatcggcgaggtcatcgggcccaagggcaagatgatcaactcgatcaccgag
cagaccggtgccaacatctccatcgaagatgacggcactgtctacgtcggtgcagcggac
ggcccgtccgcgcaggctgcgatcgatatgatcaacgccatcgccaatccgcagctgccg
aaggtcggcgagcgtttcctcggaactgttgtcaagacaacagctttcggtgcattcgtc
tcgttgctcccgggtcgcgacggcctggtgcacatctccaagctgggtagcggcaagcgg
atcaacaaggtcgaagatgtcgtcagcgtcggctcgaagcttcgcgtcgagatcgccgac
atcgacaaccgcggcaagatcagcctcgtgccggtcgaggacgacaacgccgctgtggca
gtcgacgtcccgacggagtcacccgctgagtaa
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